Query= MSMg01no261_e14.b1 MSMg01no261_e14.b1 CHROMAT_FILE:
MSMg01no261_e14.b1 PHD_FILE: MSMg01no261_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:38 2005
(515 letters)
>mm_chr5_131637594_131638508
Length = 915
Score = 882 bits (456), Expect = 0.0
Identities = 503/522 (96%), Gaps = 8/522 (1%)
Strand = Plus / Plus
Query: 1 atggcccaacagttaagagtgcttgttgttcttgcagaggactcaagtttgagttccaac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 195 atggcccaacagttaagagtgcttgttattcttgcagaggactcaagtttgagttccaac 254
Query: 61 attcataccaagtggcctacaaccaaccagaaccttagcatcagggagtctaaaatctgc 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attcataccaggtggcctacaaccaaccagaaccttagcatcagggagtctaaaatctgc 314
Query: 121 ttctgtcctctgtgacctctgcaggcgcctacacatatacaatacatg------cacata 174
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 315 ttctgtcctctgtgacctctgcaggcgcctacacatatacaatacatgcacacacacaca 374
Query: 175 cacacacacacacacacacacacacacactgaaaatactcatgtgtaaacatttgaaaat 234
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 375 cacacacacacacacacacacacacacactgaaaatactcatgtgcaaacatttgaaaat 434
Query: 235 aaagtaaatctttcatattataagatcaattgtagccaggcaatagcacatgctttcaaa 294
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aaagtaaatctttcaaattagaagatcaattgtagccaggcaatagcacatgctttcaaa 494
Query: 295 tcccagcactcaggagacagaggcgcctaagcgtgaggccagtttggtctacagagtgag 354
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 495 tcccagcactcacgagacagaggcgcctaagcatgaggccagtttggtctacagagtgag 554
Query: 355 tttcaggacagctagccagggctacacagagaaatgtctggaaaactggaaacattcccc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tttcaggacagctagccagggctacacagagaaatgtctggaaaactggaaacattcccc 614
Query: 415 atcacacaccaccaccatcaccaccataca-caaaagccaaacaacaacaacacaacgac 473
| ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||
Sbjct: 615 aacacacaccaccaccatcaccaaca-acaacaaaagccaaacaacaacaacacaacgac 673
Query: 474 aataacaaaaacccataactgtactaattactattgggtgaa 515
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 674 aataacaaaaacacataactgtactaattactattgggtgaa 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_e14.g1 MSMg01no261_e14.g1 CHROMAT_FILE:
MSMg01no261_e14.g1 PHD_FILE: MSMg01no261_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:38 2005
(449 letters)
>mm_chr5_131798759_131799607
Length = 849
Score = 797 bits (412), Expect = 0.0
Identities = 412/412 (100%)
Strand = Plus / Minus
Query: 1 agagggataaatcagtttgtggtcaactagagacatgtacttggacagagctcagcggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agagggataaatcagtttgtggtcaactagagacatgtacttggacagagctcagcggca 353
Query: 61 ggaacacaatggctatgggaacatgtggcaaagtcaagggtactcaaaccacaacagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ggaacacaatggctatgggaacatgtggcaaagtcaagggtactcaaaccacaacagaca 293
Query: 121 agaaacagtgagatgggaagagactcaggacaatacacctgcaaaccactcactcccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agaaacagtgagatgggaagagactcaggacaatacacctgcaaaccactcactcccagc 233
Query: 181 catccatttccttcaactaggcttttcctctctttcaaggtgcagtcagtcatagtgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 catccatttccttcaactaggcttttcctctctttcaaggtgcagtcagtcatagtgggg 173
Query: 241 aagtcaaacaggaaaagccagaaagggaagttgatgaatatccattcttacctccctgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aagtcaaacaggaaaagccagaaagggaagttgatgaatatccattcttacctccctgtc 113
Query: 301 cccatttcacacagtgcagcatcccctgaccaggaaatcgtcctgcccacaattttgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cccatttcacacagtgcagcatcccctgaccaggaaatcgtcctgcccacaattttgata 53
Query: 361 agtcttcccacatcaattaatgtcacccagacaactgttcacagacatgtcc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 agtcttcccacatcaattaatgtcacccagacaactgttcacagacatgtcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
