Query= MSMg01no261_p10.b1 MSMg01no261_p10.b1 CHROMAT_FILE:
MSMg01no261_p10.b1 PHD_FILE: MSMg01no261_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:28 2005
(630 letters)
>mm_chr5_73442601_73443630
Length = 1030
Score = 1094 bits (566), Expect = 0.0
Identities = 610/632 (96%), Gaps = 17/632 (2%)
Strand = Plus / Plus
Query: 1 tagatggaaaacagttgtgcaattctgacaggtgaaacccaggctatatagcctgggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tagatggaaaacagttgtgcaattctgacaggtgaaacccaggctatataggctgggggc 260
Query: 61 actttggccctgtcccttgtccccttggatttagcctggttgtttctcacagtgttctag 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 actttggccctgtcccttgtccccttggatttagcctggctgtttctcacagtgttctag 320
Query: 121 atgctctagggttctgctaggttaaggtttgaaaagtatctttcttcaatttacattgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctctagggttctgctaggttaaggtttgaaaagtatctttcttcaatttacattgta 380
Query: 181 aatatggccatgttgcattgcacattaatggcacttggccttaagtgtgtttggtgaata 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatggccatgttgcattgtacattaatggcacttggccttaagtgtgtttggtgaata 440
Query: 241 aatgaatgagtggatgaatgaatgaatgaatgaatgaatgaatgaatgaatactgcaggc 300
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 aatgaatgagtggatgaatgaatgaatgaatgaatgaatgaat--------actgcaggc 492
Query: 301 tttcaaagct-ggagaatcttaggaatttcatttgtttggtttagccatccaatccaagt 359
||||||||| || ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 493 tttcaaagccagg-gaatcttaggaatttcatttgtttggtttagccatccaa-----gt 546
Query: 360 tgttgttactattattaaccatgactgtatgtagaaagtctgtatccttggcttaattct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgttgttactattattaaccatgactgtatgtagaaagtctgtatccttggcttaattct 606
Query: 420 ggggttcaggtcagtcct-cccctgtacccccgagatcacttgacgtgaggtaaaggcag 478
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 607 ggggttcaggtcagtcctacccc-gtacccccgagatcacttgacgtgaggtaaaggcag 665
Query: 479 gactgcagatacgtcagtgttctaaggagctactgaaagctgggagtctttcctgctgac 538
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gactgcagatacttcagtgttctaaggagctactgaaagctgggagtctttcctgctgac 725
Query: 539 atttcagagggctaggtgaatccaaacacaatccccagagctctttacaggaaaaaggca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 atttcagagggctaggtgaatccaaacacaatccccagagctctttacaggaaaaaggca 785
Query: 599 aacaaaaaaaataataaccttaaccgttagaa 630
||||||||||||||||||||||||||||||||
Sbjct: 786 aacaaaaaaaataataaccttaaccgttagaa 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_p10.g1 MSMg01no261_p10.g1 CHROMAT_FILE:
MSMg01no261_p10.g1 PHD_FILE: MSMg01no261_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:29 2005
(464 letters)
>mm_chr5_73600226_73601089
Length = 864
Score = 832 bits (430), Expect = 0.0
Identities = 456/470 (97%), Gaps = 10/470 (2%)
Strand = Plus / Minus
Query: 5 ctcctgtatttgtagctttcttaga-caaagttagccaccgtgaagggtggagtcggagg 63
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 823 ctcctgtatttgtagctttcttagaccaaagttagccaccgtgaagggcggagtcggagg 764
Query: 64 ggtgttgctgacttccgttcaggggtggggtgggggttctcccagttacgggttgtgctc 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ggtgttgctgacttccattcaggggtggggtgggggttctcccagttacgggttgtgctc 704
Query: 124 tgtaagaggagaattcagttttgtggcatg---------tttttttttttttttctctat 174
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 703 tgtaagaggagaattcagttttgtggcatgttttttttttttttttttttttttctctat 644
Query: 175 atggtcatatgtagtgaccaaaccaactcggaatgttttgttactaactttgaaattcgt 234
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 643 atggtcaaatgtagtgaccaaatcaactcggaatgttttgttactaactttgaaattcgt 584
Query: 235 tattttctgtgtaggggatgttgatctgaataaattactgattatcttttacaaatttct 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tattttctgtgtaggggatgttgatctgaataaattactgattatcttttacaaatttct 524
Query: 295 agggaggaaccgctaatctgtactcagcacaatcctttctttcataaacgtggggaggag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agggaggaaccgctaatctgtactcagcacaatcctttctttcataaacgtggggaggag 464
Query: 355 gcagcagcacacagccacttcagagggcagagccaacagtcgttatgtaacctgggtaca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gcagcagcacacagccacttcagagggcagagccaacagtcgttatgtaacctgggtaca 404
Query: 415 tgatagcctctggctctaggtccaggcaccctggggggctgtgctgggga 464
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgatagcctctggctctaggtccaggcaccctggggggctgtgctgggga 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
