Query= MSMg01no262_e07.b1 MSMg01no262_e07.b1 CHROMAT_FILE:
MSMg01no262_e07.b1 PHD_FILE: MSMg01no262_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:52 2005
(406 letters)
>mm_chr5_120045153_120045958
Length = 806
Score = 656 bits (339), Expect = 0.0
Identities = 397/431 (92%), Gaps = 27/431 (6%)
Strand = Plus / Plus
Query: 1 gtgtggccaacactcaatatgtcgaaggagggcccttggaacaggaggcccggtgattcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 178 gtgtggccaacactcaatatgtcgaaggagggcccttggaacaggaggccaggtgattcc 237
Query: 61 tggactgcttaaaaccacaaactccctgctgaagcctcagggtacccacaggctcacaca 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tggaccgcttaaaaccacaaactccctgctgaagcctcagggtacccacaggctcacaca 297
Query: 121 catacttcctttctcttctctttttcttcccttttttttt------------cccccctc 168
|||||||||||||||||||||||||||||| ||||||||| |||| ||
Sbjct: 298 catacttcctttctcttctctttttcttccttttttttttttttttttttttcccc--tc 355
Query: 169 tccttcaggtggttcctgtaatctagattgggtg-------tca-g-----agtatccag 215
|||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 356 tccttcaggtggttcctgtaatctagattgggtgctgagagtcaagtatcaagtatccag 415
Query: 216 ggataaccttgaactcttgctccggttcttatctcaaatgctggaattacagacatgttc 275
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 416 ggataaccttgaactcttgctctggttcttatctcaaatgctggaattacagacatgttc 475
Query: 276 caccactcccagctatgttttcccatagctgcccagtgtcaaacttggatctcttttgcc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 caccactcccagctatgttttcccatagctgcccagtgtcaaacttggatctcttttgcc 535
Query: 336 tggatttactgccgcttctacataaaacctgcgcacagtccttacctctaaagagagtac 395
||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 536 tggatttactgttgcttctacataaaccctgcgcacagtccttacctctaaagagagtac 595
Query: 396 accctccaccc 406
|||||||||||
Sbjct: 596 accctccaccc 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_e07.g1 MSMg01no262_e07.g1 CHROMAT_FILE:
MSMg01no262_e07.g1 PHD_FILE: MSMg01no262_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:52 2005
(167 letters)
>mm_chr5_120222520_120223086
Length = 567
Score = 284 bits (147), Expect = 2e-81
Identities = 155/159 (97%), Gaps = 4/159 (2%)
Strand = Plus / Minus
Query: 9 ttcttcttcttcttctttttgtttgaaattgatcgattctatctgggagcttcaaatcga 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttcttcttcttcttctttttgtttgaaattgatcgattctatctgggagcttcaaatcga 299
Query: 69 aaccaggagaggggctttgaaatgtcaaagaaaagttacagaagacaaaaatggggcaag 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaccaggagaggggctttgaaatgtcaaagaaaagttacagaagacaaaaatggggcaag 239
Query: 129 caggctgaaggggagggagggagggagggaggcagggag 167
||||||||||| || ||||||||||||||||||||||
Sbjct: 238 caggctgaagg--ag--agggagggagggaggcagggag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
