GTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACTCTTGCTCTCGCGCATAAGGCTTGTTTACTAGTTAGGCGCAG
TGGAAGCCAGCGCCATCTTATAATGGCGATTGCTCACGGCATGGCTCTCC
ACAAGTAGGAAGCACTCTTGAGCCATTCTCAGATCCCCAAAGTAAGGCAC
TTTCTTAAAAACTCTTGGTGATCAAGAGTATGAATTTTGATGGAGTCTGG
GGTATAATTTTTTCTTTTAAAGTTAGTACTTTGTGTATTTGGTAAGAAAT
TTTGCCTACCCCAAGCTAGAAAGCCATTATCCTATCTTATTTTCTAAAAG
TATTATAATTCTGTTTGGGTATATGTGGGAAGCGGGTGTGGCCGCATGGG
CCAAGATGACACCCTGGCCCACTGCCAGGCCCCGTGAATACCCACATGTT
TACTGCCTTGCCCGAACATGTGCAGTGAAACTGCATGCGTAAGCTGCCTG
CCAAGCTAGGCTATTCTTCATGATCTGGATCCGCCTTCCTATCTGTGAAC
GAACTGAGTCTGTGCCTGATAGCGTGTGTGAATATGATTGTAAGACGAGA
TTGTTAATATTAAAATATTTACCGAATTTCGTCTAATCATTTATATTACA
TTCTATCGGTCCATTCTCCTACCTATGTTACCTTGTTATTATTGATTTGC
AATTTTCTTTTACTGTCCCCATACACACAAAGTAAATGTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAACTATGGAGGAAGGCAGCT
TACCACCTTGATCCTTGTGGGTTTGCTCAACCTGCTTTTTTTTATACCAT
CCAGGACCACCTCCCCAGGAGTGGCACCACCCACAGTGAGTTGGACAACC
TCCCCCAATATCAATCATCAATCAAGAAGATGCTGTACAGATGTACAGAT
ACACATGCCTTCAGGACAGTCTTATGGATACAGTTTCCTCTTCCCAGATA
TGTTTAGATTTGTGTCAAGTTGACAAAAGCCAACCAGAGCAGTCCCTGGG
AACACTGGGGAAAATACAGAAGAGAGCTTGCAGCTGGGGTCTAAGACAGC
CAAACAAACCACATGAGAGGAGAGGCAGGGCTCTAGGAAAACCAACCAAG
CCAATCTTGGCCAGAACCCACAATCCCACAGATTCCTCTTTGGGGAATGT
CCTGGCCGGTTTTATGTCAACTTGACACAAGCTAGAGCCACCAGAGAGGA
GGGAGCCTCAGTTAAGAAAATGCCTCTGTAAGATAACACTGTGAGCAAGA
CTGTAGGGTATTTTCTTAATTAATATTGGTGGGGGAGGTCCTAGCACATT
ATGTTAGATGCTATCTCTCGTATGGTGCCACTGCCTCTCCATCTCACTCC
CTCTTGAACTACTCTCAACGCCT

Query= MSMg01no262_p16.g1 MSMg01no262_p16.g1 CHROMAT_FILE:
MSMg01no262_p16.g1 PHD_FILE: MSMg01no262_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:46 2005
         (563 letters)



>mm_chr5_52930377_52931339
          Length = 963

 Score = 1038 bits (537), Expect = 0.0
 Identities = 555/561 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaactatggaggaaggcagcttaccaccttgatccttgtgggtttgctcaacctgctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaactatggaggaaggcagcttaccaccttgatccttgtgggtttgctcaacctgctt 260

                                                                       
Query: 61  ttttttataccatccaggaccacctccccaggagtggcaccacccacagtgagttggaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttttataccatccaggaccacctccccaggagtggcaccacccacagtgagttggaca 320

                                                                       
Query: 121 acctcccccaatatcaatcatcaatcaagaagatgctgtacagatgtacagatacacatg 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 acctcccccaatatcaatcatcaatcaagaagatgttgtacagatgtacagatacacatg 380

                                                                       
Query: 181 ccttcaggacagtcttatggatacagtttcctcttcccagatatgtttagatttgtgtca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttcaggacagtcttatggatacagtttcctcttcccagatatgtttagatttgtgtca 440

                                                                       
Query: 241 agttgacaaaagccaaccagagcagtccctgggaacactggggaaaatacagaagagagc 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 agttgacaaaagccaaccagagcagtccctgggaacattggggaaaatacagaagagagc 500

                                                                       
Query: 301 ttgcagctggggtctaagacagccaaacaaaccacatgagaggagaggcagggctctagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgcagctggggtctaagacagccaaacaaaccacatgagaggagaggcagggctctagg 560

                                                                       
Query: 361 aaaaccaaccaagccaatcttggccagaacccacaatcccacagattcctctttggggaa 420
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaccaaccaagccagtcttggccagaacccacaatcccacagattcctctttggggaa 620

                                                                       
Query: 421 tgtcctggccggttttatgtcaacttgacacaagctagagccaccagagaggagggagcc 480
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 621 tgtcctggccagttttatgtcaacttgacacaagctagagccaccagagaggagggagct 680

                                                                       
Query: 481 tcagttaagaaaatgcctctgtaagataacactgtgagcaagactgtagggtattttctt 540
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 681 tcagttaagaaaatgcctctgtaagataacactatgagcaagactgtagggtattttctt 740

                                
Query: 541 aattaatattggtgggggagg 561
           |||||||||||||||||||||
Sbjct: 741 aattaatattggtgggggagg 761


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)