Query= MSMg01no263_b14.b1 MSMg01no263_b14.b1 CHROMAT_FILE:
MSMg01no263_b14.b1 PHD_FILE: MSMg01no263_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:55 2005
(317 letters)
>mm_chr5_44831058_44831774
Length = 717
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Minus
Query: 5 gaattctactgcattttggaagataggcacatagagaaaacttgcaggatcttgaaagta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattctactgcattttggaagataggcacatagagaaaacttgcaggatcttgaaagta 458
Query: 65 caatcatatttagctgatttctattgatgtaaggtagcttttagcaggaaaaaaacaaaa 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 457 caatcatatttagctgatttctattgatgtaaggtagcttttaccaggaaaaaaacaaaa 398
Query: 125 tacaggcagcttataatctacacagaaagacacaaagaactaaaataaataaatccttag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tacaggcagcttataatctacacagaaagacacaaagaactaaaataaataaatccttag 338
Query: 185 aaaaaacctaaggggtgaaaatacttgaaaactcaaagcaatgaggcaaaagtttggacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aaaaaacctaaggggtgaaaatacttgaaaactcaaagcaatgaggcaaaagtttggacc 278
Query: 245 agctatagattggtcttcctcagacatcgtgccgctgacgtgtgaaaacttcccatatgt 304
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 277 agctatagattggtcttcctcagacaccgtgccgctgacgtgtaaaaacttcccatatgt 218
Query: 305 aaaacctatactg 317
|||||||||||||
Sbjct: 217 aaaacctatactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_b14.g1 MSMg01no263_b14.g1 CHROMAT_FILE:
MSMg01no263_b14.g1 PHD_FILE: MSMg01no263_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:55 2005
(607 letters)
>mm_chr5_44679217_44680223
Length = 1007
Score = 1038 bits (537), Expect = 0.0
Identities = 594/631 (94%), Gaps = 28/631 (4%)
Strand = Plus / Plus
Query: 1 acagccttttaaccagcatccttttgttttgaacaataatccatgtctagaaaccatcat 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtcttttaaccagcatccttttgttttgaacaataatccatgtctagaaaccatcat 260
Query: 61 ttatcaacatcctaactttttctatagatgcttagttttcttgagaaaaatctttaactt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatcaacgtcctaactttttctatagatgcttagttttcttgagaaaaatctttaactt 320
Query: 121 taaaacatactgtaaaatttggcttttagctttaattgcctatgctggtaccttcatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaacatactgtaaaatttggcttttagctttaattgcctatgctggtaccttcatcat 380
Query: 181 gggggctgtgagcatcctttctcttcttcctaaatgagaaatggctgaagaactccaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggggctgtgagcatcctttctcttcttcctaaatgagaaatggctgaagaactccaggc 440
Query: 241 tgaaaaccaatgtgtttagaaaataactctgaggtaaaggatgattccaaccagacatta 300
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 tgaagaccaatgtgtttagaaaataactctgaggcaaaggatgattccaaccagacatta 500
Query: 301 aattaacaaagactaggtctgtgcaagctgcctttcaaatgccacagaagcaagagggga 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 aattaacaaagactaggtctgtgcaagctgcctttgaaatgccacagaagcaagagggga 560
Query: 361 agtgacaggtctgagaatgtgagtaaaaaacaaacaaacagaaacaaaagtccaaaagca 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 agcgacaggtctgagaatgtgagtaaaaaacaaacaaacagaaacaaaagtccaaaaaca 620
Query: 421 aacaaacaaac----------------------------ctcaatcaaacaaacctctcc 452
||||||||||| |||||||||||||||||||||
Sbjct: 621 aacaaacaaacaaacaaacaaacaaacaaacaaaaaaacctcaatcaaacaaacctctcc 680
Query: 453 aaggagaagacaggtcaggtagcaatgtggaggataacagaagaaggtggatgcatgctg 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaggagaagacaggtcaggtagcaatgtggaggataacagaagaaggtggatgcatgctg 740
Query: 513 cagcaggcaggaggctacccctccccctcttctcactcccccctttcctcctcctccttt 572
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 cagcaggcaggaggctacccctccccctcttctcactcctccctttcctcctcctccttt 800
Query: 573 tcctctaccatatgtcttctgaaagcacacg 603
|||||||||||||||||||||||| ||||||
Sbjct: 801 tcctctaccatatgtcttctgaaaacacacg 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
