NGAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAA
CAAACAAACAAACAAACAAAAAACAAAACAAACAAACAAAAAAACCCCAA
AACCCCAAAAGACTACATTGAAGTTATCACTCACCACTGTTAGAATAGGT
ATTGCTAAGTAAATTGTGAATGCTGGCAAAGATGTATGGAGAAGGGAATC
ACCCTGTGAGTATAAATTAGCCCAGTGACGATGGAAACCAATGTGGAGCG
TCTTCAAAAGAAACTAAATATAGAACTGTCGTATGACTCAGCTATACCAC
TTCACAGTATACACCTTATTAAATGTCACCTACCACCCACAGAGATAATT
CACGTTTATTGAAACATTATCTACAGCATCCAAGGTGAAAATATCATGAT
GAATGTCCTCTATGGAGTTTGATTCAGCCATAAAGAAAAATAGAATTAAG
TTGTTTGCAGGAAAATGGGTACAATTGAAGGTCACCATTCAAAGCAAATG
AGTCAGATTCAAACACAAATATTCAATATTTTCTCTTACTTCTGGACTCT
AGATTCTATATAGATTTAAGTTATAAAAATTTATGACAAGAAAGGAGATG
CAAGACCATCAGAGGAATGAAAAAATATTTGGGAGTGTATGAAAATGGAA
GGTGAGGGGGTATGATCTTAGCGCTGGTGTTTTTGTATTTAAATG

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTCAGTGAAGTATATGCAGAGAAATC
AAGGAAGAGAGAAAGAAAGACCGGGAGGAGAGAGACAGAGACAGATATTT
TAGCCCACAAATTAAGGGCTGATAACTGCTCTCATAATTTCATTAGAGAA
AGAAGCCACATCTCGAACTCCTTCAGTGCTCATTCACAAAGCCACAGAAC
TTTAGAGCTCAAAAAGGGCCAAGAAGTCATCCAGCTCAATTTCCTCATTT
TCCCAATTCCCCCAAAGATTGGCTTCATGAAAACTCCCCTCTCTAGGCAG
AATGAGAGCTAGACCTGAGGTCGATCTTGTGTGCTCTTTCAGCTACCCCA
AATGCTTTCTACGCGTTACTTGAAGTTCAATATTTTTTTCTTGTGCAAGC
ACTAATGTCGAAGTAATAGAAGTTCATGATTCTAAGAGGCACATACTGTG
CCTCCTACTAAATTACTATAATCAAACCCCAAGCACTGAAGGACGTGATA
AGATATGTCCTTTATACGTCATAATCCCACTTAAAGAGACTCTATTTGCA
TTGGCATTGCCTTATTTTTATATTCCAGATTTGTGGCACTTAAAATTCCG
TGTATAATTCTATGCTGTTCTAAATGAGCTATTTCAAATTTCATTCCTTC
TTCAGAGCACACAGTCCTATTATGAGTAATTAGGATAATTGGTTTT

Query= MSMg01no263_l11.g1 MSMg01no263_l11.g1 CHROMAT_FILE:
MSMg01no263_l11.g1 PHD_FILE: MSMg01no263_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:42 2005
         (622 letters)



>mm_chr5_9587853_9588874
          Length = 1022

 Score = 1120 bits (579), Expect = 0.0
 Identities = 591/595 (99%)
 Strand = Plus / Minus

                                                                        
Query: 28   aggaagagagaaagaaagaccgggaggagagagacagagacagatattttagcccacaaa 87
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 aggaagagagaaagaaagacagggaggagagagacagagacagatattttagcccacaaa 963

                                                                        
Query: 88   ttaagggctgataactgctctcataatttcattagagaaagaagccacatctcgaactcc 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962  ttaagggctgataactgctctcataatttcattagagaaagaagccacatctcgaactcc 903

                                                                        
Query: 148  ttcagtgctcattcacaaagccacagaactttagagctcaaaaagggccaagaagtcatc 207
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 902  ttcagtgctcattcacaaagccacagaattttagagctcaaaaagggccaagaagtcatc 843

                                                                        
Query: 208  cagctcaatttcctcattttcccaattcccccaaagattggcttcatgaaaactcccctc 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842  cagctcaatttcctcattttcccaattcccccaaagattggcttcatgaaaactcccctc 783

                                                                        
Query: 268  tctaggcagaatgagagctagacctgaggtcgatcttgtgtgctctttcagctaccccaa 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782  tctaggcagaatgagagctagacctgaggtcgatcttgtgtgctctttcagctaccccaa 723

                                                                        
Query: 328  atgctttctacgcgttacttgaagttcaatatttttttcttgtgcaagcactaatgtcga 387
            |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722  atgctttctatgtgttacttgaagttcaatatttttttcttgtgcaagcactaatgtcga 663

                                                                        
Query: 388  agtaatagaagttcatgattctaagaggcacatactgtgcctcctactaaattactataa 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662  agtaatagaagttcatgattctaagaggcacatactgtgcctcctactaaattactataa 603

                                                                        
Query: 448  tcaaaccccaagcactgaaggacgtgataagatatgtcctttatacgtcataatcccact 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602  tcaaaccccaagcactgaaggacgtgataagatatgtcctttatacgtcataatcccact 543

                                                                        
Query: 508  taaagagactctatttgcattggcattgccttatttttatattccagatttgtggcactt 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542  taaagagactctatttgcattggcattgccttatttttatattccagatttgtggcactt 483

                                                                   
Query: 568  aaaattccgtgtataattctatgctgttctaaatgagctatttcaaatttcattc 622
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482  aaaattccgtgtataattctatgctgttctaaatgagctatttcaaatttcattc 428


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)