TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGGATCCGCGGA
ATTCTCCTTCACCTTACCCTTGCATATGCCAATGCAGGCCACTCTCAGTC
CAGGACACACTGCTCTGTGGCATGGCTGCATATTCACAAAACCCAGCGAG
CGACTCAGAGTTATGTGCAGGCATGAGAATACACCATGTTATTAAATGAC
AGTACAGCTGTGTGAGAATTGAGAGATGGCAGTTGGTGTTGGAAGCTGAG
CAGAAAGAACAAGGCAAAAACAAGGCCAATCAGATTCTAGCGATTCATCT
TATTTGCCATTTATTATAAAAATGTAATCTTTTTACATAAAAGATGCTTT
AAAAACAGCAAAATTTACCCAAATCTACCAAATGTAGGGATTTGAATCCA
GGGGCCAAAAACATGGAACATAATCATACATTTTCTAGTAGTTAATTCCA
GATACACATTTCCAAGTATATGGTAAAAGGTAAAAGGGCAAATGCCGGCC
TCCACTGGGAGCTAACAAAACTAAGTATCTCCGCCCAAGATCGGGTCATC
CTTTTACTTAGCATGAAACTTAGAACTTTAAGTCTTACTGTACAGTGTGA
ATATAAAGACAGACAGACAACAGAGATGAGTGCAGACACATCCATTCTAA
CCCTACACCTTTCTGTATTTAAAAAATTGCACCATGTCTGTTAGAAATAA
CGAACATGCAGAAGGCATTC

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTATTCCAGCAGGATTTGGGGAAG
ACTTTGCTCTGATCAGCTCTGTGAGTTCTGTGACATAACTGGCACTTGGC
TAAGGAAAAGGGACATCATGCACACACTCTCATGGTTCTCTTATTAAAAC
AAATCATTCTAAACACTGCTTTGCCCCAACAAAAGCCAGAGAGTGACAGG
GCAGGGCAGTGAGTTCATATTCATTCCAGAGCACTCAATGAAAAATGGTG
GCTCAGATCCCAGAAGGATACTGCAGCTGCTCCAGGGCCTGGTGGTTGAT
GGTGATCATGCTGTTGTAGATGAAGGTGCTGCTCAGAAGCACGCTGAGGG
CAAAGATCCACAAGTCGTTCTTAGGATCACCCTAGAAAATATGTGAAGGA
AGAGGTCTGAGCAGAGCACTCCTCAGAAGGGACTTGGGCTGGTCCTGTGG
CCTTATTACTCCAGATACTCTGGGGGCCAAAGCAGGAGGAGCAAAAGCCC
TTTACCTGGTTAAAGAAAGAATGTGAAGTCAACCTGAGAAACTTAGTAGA
ACCTATATTACCCTGCATAGAACAAAAATGTCAACTGGAGCAAGCATCTC
AATGTTTGATCAGGCACACTGAATTTCATAGGCAAGGGGAGGGAGAATAA
ACTTAAAATCATTGGCACAGGAAGACTTTCTTAACAGGA

Query= MSMg01no263_m23.b1 MSMg01no263_m23.b1 CHROMAT_FILE:
MSMg01no263_m23.b1 PHD_FILE: MSMg01no263_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:50 2005
         (666 letters)



>mm_chr5_105918464_105919529
          Length = 1066

 Score = 1241 bits (642), Expect = 0.0
 Identities = 657/662 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccttcaccttacccttgcatatgccaatgcaggccactctcagtccaggacac 64
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gaattctccttcaccaaacccttgcatatgccaatgcaggccactctcagtccaggacac 807

                                                                       
Query: 65  actgctctgtggcatggctgcatattcacaaaacccagcgagcgactcagagttatgtgc 124
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 806 actgctctgtggcatggctgcatattcacaaaacccagcgagcgattcagagttatgtgc 747

                                                                       
Query: 125 aggcatgagaatacaccatgttattaaatgacagtacagctgtgtgagaattgagagatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 746 aggcatgagaatacaccatgttattaaatgacagtacagctgtgtgagaatcgagagatg 687

                                                                       
Query: 185 gcagttggtgttggaagctgagcagaaagaacaaggcaaaaacaaggccaatcagattct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gcagttggtgttggaagctgagcagaaagaacaaggcaaaaacaaggccaatcagattct 627

                                                                       
Query: 245 agcgattcatcttatttgccatttattataaaaatgtaatctttttacataaaagatgct 304
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agtgattcatcttatttgccatttattataaaaatgtaatctttttacataaaagatgct 567

                                                                       
Query: 305 ttaaaaacagcaaaatttacccaaatctaccaaatgtagggatttgaatccaggggccaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttaaaaacagcaaaatttacccaaatctaccaaatgtagggatttgaatccaggggccaa 507

                                                                       
Query: 365 aaacatggaacataatcatacattttctagtagttaattccagatacacatttccaagta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaacatggaacataatcatacattttctagtagttaattccagatacacatttccaagta 447

                                                                       
Query: 425 tatggtaaaaggtaaaagggcaaatgccggcctccactgggagctaacaaaactaagtat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tatggtaaaaggtaaaagggcaaatgccggcctccactgggagctaacaaaactaagtat 387

                                                                       
Query: 485 ctccgcccaagatcgggtcatccttttacttagcatgaaacttagaactttaagtcttac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctccgcccaagatcgggtcatccttttacttagcatgaaacttagaactttaagtcttac 327

                                                                       
Query: 545 tgtacagtgtgaatataaagacagacagacaacagagatgagtgcagacacatccattct 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgtacagtgtgaatataaagacagacagacaacagagatgagtgcagacacatccattct 267

                                                                       
Query: 605 aaccctacacctttctgtatttaaaaaattgcaccatgtctgttagaaataacgaacatg 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaccctacacctttctgtatttaaaaaattgcaccatgtctgttagaaataacgaacatg 207

             
Query: 665 ca 666
           ||
Sbjct: 206 ca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)