CTTTTTCTTTTTTTCTNTTTANCCTCCCGAAACCCCCCTTCTCTTNNTTT
ATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCCGCACTTGCGNGGN
ANNCAANNNGATTTCAAGAAAAAGGGAANNAANNGAANNNANNNNCCNAA
ANNNCANAAAAANNAATTTTCCCCATTTACAAATTTGTTTCAAACTTTTA
AAAAGTGTAAATTTGTCAATCATACATTACTTAAGAGTTTTTCCTTCATA
ATTTATGTAAATGATATTAACAGGGTTGATATCAGTCAACATTCAAGTTC
TTTTTTAGATAATTCTCTATAGTCAAGTAGACACCAGAAATCAGTTTGTG
TATTTTATAACACTACTTTTTTTTTTTTTACAAANAGAAGAACNAAAAAA
GGCAAACATTTTTTTTTTTTTTCACCCCCCCCCCCGNAGATTTATAGTTG
AAAATTATNAAATGGNTGGTCCTCATATAAAGTAACNTAAAACCTGTGGG
GTGGGGGGGGTATTTTTCTAGACTCCTCCATTTGGAGGACCTTGTGGAAA
CTAACTAATAGTATGAATTGATGAGTATTTTAAGACATATGATACTAGAA
CAAAAAATACTTAGAGATTCATGGTGACAAGCATGAATAATTAAAAAGAA
TATGACACTTAAATTGCATTAAATTTGTTAATGATATTAAAATATAAATC
ATGAATATAAATAATTACATAAAATATAATAACATAAGAATTATTTATTT
ATTTTAAGAAAGGAAAGAGAAAGATAAAATAATATTTTTAATTTATTAAT
AAGTATGTTGGTTATAATAATAAAGGATGAGAGGTATTGATATTTTAATT
TGTGTTG

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAATGTGCTTCATATTAGAATTTG
GATTTTGAATAAAAGGTGTCTAGTATACGTGTCTTGAATATTTTAATCAG
AGATGTACTTTGTATTACAGTAGAAAAGTAAACTTTTTCTGCCAATATTT
GTTATAAGTATATTTCACACACATCCTTTAGAAGCCAGTAGCATCAGTAA
TTTTCCAATTTCTTATAATTCAAATATCAAATATTTATCAATGATATTTA
ATCAAACTAGTAAGTATTACTCAGTGACACAGAAATTAATTCAACAATTT
ATATTACCTTATTTTCTTTTTTAGCACCCCACCCTCCTAAAAATTCTAAA
TTGTCATAGTAAATCAATTATATCATTAAGGTTGTCATGCAGAGCAAACT
ATGAATCGCAGTTTACTACTATTGCTCTGAAGATTATTGAATGATAGAGA
CCAATGAATATATTACTTAATTACTTATGTGACCACTTTTATTTTTTCAT
AAATAACTGTGAATGATAATTAGTCTACTGGTAACTCAGAGATTGGCCAT
TAAGCTTTTATTAAGTCATAATCATGACTTCATAATAATGTCTTGCATTT
TTTACCAGTTGCAGCTTATATATCAGAGCTTAGACATAATGATTTAATCA
TCTTTATTACTTCTGATTCCACTTCTAACTTCAATTCTCTTGGTTAAGTT
CTTCATTCCGC

Query= MSMg01no265_e20.b1 MSMg01no265_e20.b1 CHROMAT_FILE:
MSMg01no265_e20.b1 PHD_FILE: MSMg01no265_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:45 2005
         (198 letters)



>mm_chr5_80351113_80351710
          Length = 598

 Score =  329 bits (170), Expect = 8e-95
 Identities = 182/186 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaatttgtttcaaacttttaaaaagtgtaaatttgtcaatcatacattacttaagagttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaatttgtttcaaacttttaaaaagtgtaaatttgtcaatcatacattacttaagagttt 327

                                                                       
Query: 61  ttccttcataatttatgtaaatgatattaacagggttgatatcagtcaacattcaagttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttccttcataatttatgtaaatgatattaacagggttgatatcagtcaacattcaagttc 267

                                                                       
Query: 121 ttttttagataattctctatagtcaagtagacaccagaaatcagtttgtgtattttataa 180
            ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cttaaaagataattctctatagtcaagtagacaccagaaatcagtttgtgtattttataa 207

                 
Query: 181 cactac 186
           ||||||
Sbjct: 206 cactac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 598
Length adjustment: 8
Effective length of query: 190
Effective length of database: 590
Effective search space:   112100
Effective search space used:   112100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no265_e20.g1 MSMg01no265_e20.g1 CHROMAT_FILE:
MSMg01no265_e20.g1 PHD_FILE: MSMg01no265_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:45 2005
         (294 letters)



>mm_chr5_80191230_80191923
          Length = 694

 Score =  559 bits (289), Expect = e-164
 Identities = 292/293 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatgtgcttcatattagaatttggattttgaataaaaggtgtctagtatacgtgtcttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgtgcttcatattagaatttggattttgaataaaaggtgtctagtatacgtgtcttg 260

                                                                       
Query: 61  aatattttaatcagagatgtactttgtattacagtagaaaagtaaactttttctgccaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatattttaatcagagatgtactttgtattacagtagaaaagtaaactttttctgccaat 320

                                                                       
Query: 121 atttgttataagtatatttcacacacatcctttagaagccagtagcatcagtaattttcc 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttgttataagtgtatttcacacacatcctttagaagccagtagcatcagtaattttcc 380

                                                                       
Query: 181 aatttcttataattcaaatatcaaatatttatcaatgatatttaatcaaactagtaagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatttcttataattcaaatatcaaatatttatcaatgatatttaatcaaactagtaagta 440

                                                                
Query: 241 ttactcagtgacacagaaattaattcaacaatttatattaccttattttcttt 293
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttactcagtgacacagaaattaattcaacaatttatattaccttattttcttt 493


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space:   195225
Effective search space used:   195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)