Query= MSMg01no266_f08.b1 MSMg01no266_f08.b1 CHROMAT_FILE:
MSMg01no266_f08.b1 PHD_FILE: MSMg01no266_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:06 2005
(295 letters)
>mm_chr5_135690324_135691018
Length = 695
Score = 516 bits (267), Expect = e-151
Identities = 289/297 (97%), Gaps = 3/297 (1%)
Strand = Plus / Minus
Query: 1 gctggcctcgaactcagaaattcgcctgcctctgcctcccaagtgctgggattacacggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 684 gctggcctcgaactcagaaattcgcctgcctctgcctcccaagtgctgggatta-aaggc 626
Query: 61 atgcgccaccacaaccagcttgtc--ttttttattttttaagaggtgagatgtcagagcc 118
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 625 atgcgccaccacaaccagcttgtctttttttttttttttaagaggtgagatgtcagagcc 566
Query: 119 aggtgtggtggctcgcacctatgaccccagcattcaagacacagaggcaggggaatttct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggtgtggtggctcgcacctatgaccccagcattcaagacacagaggcaggggaatttct 506
Query: 179 aagtttgaggatatttctaagtttgtttaccttccaagtaaacaaaacgacagagtctcc 238
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 aagtttgaggatatttctaagtttgtttaccttccaagtaaacaaaaccacagagtctcc 446
Query: 239 ctataatggccaagatattcttcagactctggaaaagccatgcgcctaagcttgagg 295
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctataatggccaagagagtcttcagactctggaaaagccatgcgcctaagcttgagg 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no266_f08.g1 MSMg01no266_f08.g1 CHROMAT_FILE:
MSMg01no266_f08.g1 PHD_FILE: MSMg01no266_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:06 2005
(288 letters)
>mm_chr5_135543193_135543880
Length = 688
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 1 cagatttggacagctctcagtggagcttccctgtgatgaagtcacacttgcatctgcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatttggacagctctcagtggagcttccctgtgatgaagtcacacttgcatctgcctg 260
Query: 61 tgggtgacatcataggaagcacatgcctgaggcccagggttccgtctctatcgaggcaat 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tgggtgacatcataggaagcacatgcctgaggcccagggttctgtctctatcgaggcaat 320
Query: 121 agtggaaatggtggctacaatgtgccatttgcaagtcaagtacacaggaaccggaggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtggaaatggtggctacaatgtgccatttgcaagtcaagtacacaggaaccggaggaag 380
Query: 181 aaggaccagaagttcagtgccttctctgggtgcagttattaagcctttaatgctagcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggaccagaagttcagtgccttctctgggtgcagttattaagcctttaatgctagcact 440
Query: 241 caggaggcatgtggagctctgtgaatctaaggccaacctgttctac 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggaggcatgtggagctctgtgaatctaaggccaacctgttctac 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
