CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTGATAATTCCAGAAGATTTCTTTTAAAAGTTATTCCAGGTCAGG
TGTGTAGATATTACTAAGTGTATCACTACTCTTGGAAGTATAACTGATAC
TGTCTACATTCTGAGATCCTTCTGTGGCCAAAATGTCTCTGAAACTGTAT
ATTCCTTCTCCATGTCTTCTACTTTGCAGTGGCTTTTTCAGTCAATATTG
ATTTTCCTCCATGATCTGCTTTTGCATTCAGTGGAAGAGTTGGTTGGGAT
GATTTCAATTGCCAGAGTCTTTTATGCACAGCTTGTTTCTCTCTGGTGCT
TTAGGGTATAATCTCCAGACTGTTGGGTGAATGTGAACTCTGGATAGATG
TTGTCACTTTAAAGGAAACTCAAGAGGGTTTCTTCTTTTGTTTGGTTTGG
TTCGATGGAGTCTAACTAATTAGTGCACCCAGCCACAAATAGTGACATTT
ATTGTAGTCTTCAGTAATCTTAAAAATATTTCATTGCACAGAACCATTTA
TGAACAATGGAAACAGAATAAAGATTACAAGATATATTTACATAAAGTAC
TTGCAGAACAGAAACAGTGGCATATAGTCAGCCACACCACCCAGTCCAAT
TCAAAGCATGGAAAAGCTAGAAATGGTTTTTCTTTCCTGAACATATTGAA
CATAAACATTCTTTTTTGTCACCAAACATGAGGTC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGCACATGTAGCATTGAAGTTTC
TTCATCCAGTGTAAGCAGCATCCCTGCAATTTTTCTGTAACCCATCATAG
GACATCAGTCATTTGCTCAAACATTACAGATTCTGTAGCTTTTGGATTTC
TTGTTTTTAGATTAGAGAAATCTAAAACTAACTCCCTTTTGTGTTTATTA
CCTTTTAATTGTTTTATAGAATATACATATGCTCAATTTACATTTGTAAT
TTTGGTAAAAACTATCTACTGTTGAACATGGAATCACTTTGAATTGGCTC
AATCCAAAGGATTTTAGTCTTACCACGCCCCTAGAAACATGATGTCATAA
TTTTTTCTAATACATGAAGATAATATCAGGAAACTAAAGATTTCCAAAAT
ACCCCTTATATTATCATGGTTAAATATTAAATATATCCCAAGTTTAACCA
ATATAGTAAGTACCATTTTAGGATTAATTCAAAGATTGATCATATTTATT
ATATCTTAAGTCAATTTTGCAATAAGTAAACTACGATATGAAAGTCAGTT
ATATTTTTACTAATTTCATATATAATCTGCCCCCATGGATAAGAGTGGGA
AGAAATAGAAATAAAGAAAAACTACATCACATAATAATACAAAAATTTTA
AAGTATGACATATTTATTTTTATAATTTATTGCT

Query= MSMg01no266_p11.b1 MSMg01no266_p11.b1 CHROMAT_FILE:
MSMg01no266_p11.b1 PHD_FILE: MSMg01no266_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:54 2005
         (609 letters)



>mm_chr5_62396836_62397844
          Length = 1009

 Score = 1131 bits (585), Expect = 0.0
 Identities = 603/609 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tactcttggaagtataactgatactgtctacattctgagatccttctgtggccaaaatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tactcttggaagtataactgatactgtctacattctgagatccttctgtggccaaaatgt 750

                                                                       
Query: 61  ctctgaaactgtatattccttctccatgtcttctactttgcagtggctttttcagtcaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ctctgaaactgtatattccttctccatgtcttctactttgcagtggctttttcagtcaat 690

                                                                       
Query: 121 attgattttcctccatgatctgcttttgcattcagtggaagagttggttgggatgatttc 180
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 689 attgattttcctccatgatctgcttttgcattcagtggaagagctggttgggatgatttc 630

                                                                       
Query: 181 aattgccagagtcttttatgcacagcttgtttctctctggtgctttagggtataatctcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aattgccagagtcttttatgcacagcttgtttctctctggtgctttagggtataatctcc 570

                                                                       
Query: 241 agactgttgggtgaatgtgaactctggatagatgttgtcactttaaaggaaactcaagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agactgttgggtgaatgtgaactctggatagatgttgtcactttaaaggaaactcaagag 510

                                                                       
Query: 301 ggtttcttcttttgtttggtttggttcgatggagtctaactaattagtgcacccagccac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggtttcttcttttgtttggtttggttcgatggagtctaactaattagtgcacccagccac 450

                                                                       
Query: 361 aaatagtgacatttattgtagtcttcagtaatcttaaaaatatttcattgcacagaacca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 449 aaatagtgacatttattgtagtcttcagtaatcttaaaaatatttcattgcacagaaaca 390

                                                                       
Query: 421 tttatgaacaatggaaacagaataaagattacaagatatatttacataaagtacttgcag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 389 tttatgaacaatggaaacagaataaagattacaagatatatttacataaagtagttggag 330

                                                                       
Query: 481 aacagaaacagtggcatatagtcagccacaccacccagtccaattcaaagcatggaaaag 540
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 329 aacagaaacagtggcatatagtcagccacaccacccagaccaattcaaagcatggaaaag 270

                                                                       
Query: 541 ctagaaatggtttttctttcctgaacatattgaacataaacattcttttttgtcaccaaa 600
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 269 ctagaaatggtttttctttcctgaacatattgaacataaacattcttttttgtcaccaca 210

                    
Query: 601 catgaggtc 609
           |||||||||
Sbjct: 209 catgaggtc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no266_p11.g1 MSMg01no266_p11.g1 CHROMAT_FILE:
MSMg01no266_p11.g1 PHD_FILE: MSMg01no266_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:54 2005
         (350 letters)



>mm_chr5_62304823_62305572
          Length = 750

 Score =  414 bits (214), Expect = e-120
 Identities = 217/218 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaacatgatgtcataattttttctaatacatgaagataatatcaggaaactaaagatttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacatgatgtcataattttttctaatacatgaagataatatcaggaaactaaagatttc 260

                                                                       
Query: 61  caaaataccccttatattatcatggttaaatattaaatatatcccaagtttaaccaatat 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaatgccccttatattatcatggttaaatattaaatatatcccaagtttaaccaatat 320

                                                                       
Query: 121 agtaagtaccattttaggattaattcaaagattgatcatatttattatatcttaagtcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtaagtaccattttaggattaattcaaagattgatcatatttattatatcttaagtcaa 380

                                                 
Query: 181 ttttgcaataagtaaactacgatatgaaagtcagttat 218
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttgcaataagtaaactacgatatgaaagtcagttat 418


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space:   252681
Effective search space used:   252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)