Query= MSMg01no267_f09.b1 MSMg01no267_f09.b1 CHROMAT_FILE:
MSMg01no267_f09.b1 PHD_FILE: MSMg01no267_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:23 2005
(320 letters)
>mm_chr5_49991096_49991815
Length = 720
Score = 580 bits (300), Expect = e-170
Identities = 312/316 (98%)
Strand = Plus / Minus
Query: 5 gaattctctgacctcaggtacagaaactcctattttgcaagtggttatcataggaagatg 64
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 520 gaattctctgacctcaggtacacaaactcctattttgcaaatggttatcataggaagatg 461
Query: 65 ctttccgaagaactgtagcaagcagcagaatggctgtatcactatctactgaggattaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctttccgaagaactgtagcaagcagcagaatggctgtatcactatctactgaggattaca 401
Query: 125 cacttgcctctaaagtagtgaggcatatcacagtgacaaggatttactattgtctctgcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cacttgcctctaaagtagtgaggcatatcacagtgacaaggatttactattgtctctgcc 341
Query: 185 tgaatcatgaatcagccttggagtcagtccaattattggactcatatatatcatcataaa 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 340 tgaatcatgaatcagccttggagtcagtccaattattggactcatatatatcatcagaaa 281
Query: 245 gaacatatctgtaaatgaaatattttataaacaaataattgtaatggccatcccaaatat 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 280 gaacatatctgtaaatgaaatattttataaacaaaaaattgtaatggccatcccaaatat 221
Query: 305 tatgctccaatgctct 320
||||||||||||||||
Sbjct: 220 tatgctccaatgctct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_f09.g1 MSMg01no267_f09.g1 CHROMAT_FILE:
MSMg01no267_f09.g1 PHD_FILE: MSMg01no267_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:23 2005
(281 letters)
>mm_chr5_49842063_49842743
Length = 681
Score = 528 bits (273), Expect = e-154
Identities = 280/283 (98%), Gaps = 2/283 (0%)
Strand = Plus / Plus
Query: 1 attgctaagatgggacatatgccagaggaattctgccaaatgccactaaaattgtgtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgctaagatgggacatatgccagaggaattctgccaaatgccactaaaattgtgtgct 260
Query: 61 agataagagcaaaaggcattttccatatcagtctgttcgctgtagttttgttcttcctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agataagagcaaaaggcattttccatatcagtctgttcgctgtagttttgttcttcctgt 320
Query: 121 ttctgttgcttgctgttagtgtttgaaac--ggcctcattatgtagcctgagctggtttg 178
||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ttccgttgcttgctgttagtgtttgaaacagggcctcattatgtagcctgagctggtttg 380
Query: 179 actcctagcccctttgcctcttgagtcttgggattacagatgtttagcaacacactctgc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actcctagcccctttgcctcttgagtcttgggattacagatgtttagcaacacactctgc 440
Query: 239 cctatataaataacccttaactcctataatacttctgaagttt 281
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctatataaataacccttaactcctataatacttctgaagttt 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
