Query= MSMg01no267_i08.b1 MSMg01no267_i08.b1 CHROMAT_FILE:
MSMg01no267_i08.b1 PHD_FILE: MSMg01no267_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:37 2005
(320 letters)
>mm_chr5_42869251_42869970
Length = 720
Score = 557 bits (288), Expect = e-163
Identities = 305/316 (96%), Gaps = 9/316 (2%)
Strand = Plus / Plus
Query: 5 gaattcttacagcaagggaccatcttcagacttttacttttgtattacctattgaagtgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttacagcaagggaccatcttcagacttttacttttgtattacctattgaagtgg 264
Query: 65 gagtccatgcatgtttacacataagcccatccagacttatagaaattaacaagtttttag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagtccatgcatgtttacacataagcccatccagacttatagaaattaacaagtttttag 324
Query: 125 tcgagagacttcactttcagtgaccaacacaatgtaccagatttggtccctcaaatgtca 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 tcgagagacttcactttcagtgaccaacacaatgtaccagatttagtccctcaaatgtca 384
Query: 185 aggtgaatttttctttacctgtgatttttttaaaaataaggaagaaagtgatcatatcga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggtgaatttttctttacctgtgatttttttaaaaataaggaagaaagtgatcatatcga 444
Query: 245 tgtgaccaacaacaacaacaacaacaaaaattcatctttttaatagattagggagtttgg 304
||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 cgtgaccaacaacaacaa---------aaattcatctttttaatagattagggagtttgg 495
Query: 305 ggtcaagaattcctta 320
||||||||||||||||
Sbjct: 496 ggtcaagaattcctta 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_i08.g1 MSMg01no267_i08.g1 CHROMAT_FILE:
MSMg01no267_i08.g1 PHD_FILE: MSMg01no267_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:37 2005
(289 letters)
>mm_chr5_43028690_43029378
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%)
Strand = Plus / Minus
Query: 1 tagaagaacacttgtgcatagaataggagcattgaaagagagtcttggcccatttggaca 60
|||||| |||||||| |||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 489 tagaaggacacttgtccatagaataggagcattgaaagagagtcatggctcatttggaca 430
Query: 61 aaaatgacagagttctttctctggtttcttgtggcttgttgaatatattattaatcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaaatgacagagttctttctctggtttcttgtggcttgttgaatatattattaatcacag 370
Query: 121 gattttcagggtgagtgggtttgaagatgacattagtgagtggatatggaggtgacaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gattttcagggtgagtgggtttgaagatgacattagtgagtggatatggaggtgacaatg 310
Query: 181 gccttgctcagctaaaactcaaagcttgtaggatcatattctttttgaaaggacacaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gccttgctcagctaaaactcaaagcttgtaggatcatattctttttgaaaggacacaata 250
Query: 241 cttttattctcttcaattactcctgctccatttgttgatgacccacctc 289
|||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 249 cttttattctcttcaattactcctgctcgatttgttgatgacccacctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
