XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCT
TGATCCACTTAGATTTGACCTTTGTACAAGGAGATAAGAATGGAACAATT
CACATTCTTCTACATGCTAACCACCACTTTAGCTAGCACCATTTGTTGAA
AATGCTTTCTTCTTTCCACTGGATGGTTTTAGCTCCGTTGTCAAAGATCA
AGTGACCATAGGTGTGTAGGTTCATTTCTGGGTCTTCAATTCTATCCCAT
TGATCTACCTATCTGTCACTGTACAAGTTCCATGCATTTTTTATCACAAC
TGCTCTGTAGTACAACTACAGGTCTGACATGGTGATTCCACCAGAGGTTC
TTTTATTGTTGAGAATAGTTCTTGGCATCCTATGTTTTTTTGTGATTCCA
GATGAATTTGCAAATTGACCTTTCTAACTCAGTGAAGAATTGAGTTGGAA
TTTTGATGGGGAGTACATTGAATCTGTAGATGTTTCTGGCAGGATAGCCA
TTTTTAGTATATGAATCCTGCCAATCTACGAGCATGGGAGATCTTTCCAT
CTTCTGAGATCTTCTTCGATGTCTTTGTTTGGAGACTTGAAGTTCTTATC
ATACAGATCTTTCACTGCCTTAGTTAGAGGCAAACCAAGGTATTTTATAT
CATTTGTGACTATTGTGAAGAGTGTTGTTTCCCTAATTTCTTTCTCCACC
TGTTTATCCTTTGTGTAGAGAAAGGCCAC

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCAGGCAGAATTCTGAGTTCGAGACC
AGCCTGGACTCCAAAGTGAGTTCCAGGTAAGCCAGGGCTATACAGAGAAA
CTCTGTCTTGAAAAACAAAAAACAAAAAACAAACAAACAAAAAACACCAA
CAAGACAAAGCCCAAACATCTTTATCTTAGCAAGGTTGTTCTGGAGAGCT
TCTTGCCAAATTCTATCCCTCTGACTGAAAGACCTCCGTGGGGATTCCCC
GACCTGAGTCACGAGATAGCATGCACCCAAAGAATCACAAGAAACTATCT
AACTAAAAACACAAGGTAGTTTAATGACGGAGCTCCAGGCCGACACATAT
CTCACGCAGGAGACAGAGGTGTCAACCAGGAAGCTCAGAAGCTAGGGGTT
TATATAGGAAAAGAGTGGGGGTAGGATAATAATTGGTTCAGCTTCACACA
ATGGGACAGTTTAAACATCAGCAAACTGTACATGCAGAGCAAGGTAACAG
CAGGGCATGTGGTAACATTTAACCCATGTCAGAAGGGCAGGAGATAGGAA
ATTGCCAAGCCAGTCAGGACATTCGTGTATGACTTCCCTATATTTATGGT
TAGCCAGTTCCTGGGAAGACTTTACAGCCTTTGTTCTTTGCTCTAGGACC
AAAAATCCTTCCTAACTAGCAAGCCGCATGAGTCATG

Query= MSMg01no270_l06.g1 MSMg01no270_l06.g1 CHROMAT_FILE:
MSMg01no270_l06.g1 PHD_FILE: MSMg01no270_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:26 2005
         (663 letters)



>mm_chr5_105081962_105083024
          Length = 1063

 Score =  791 bits (409), Expect = 0.0
 Identities = 470/495 (94%), Gaps = 11/495 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcaggcagaattctgagttcgagaccagcctggactccaaagtgagttccaggtaagcca 60
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| 
Sbjct: 490 tcaggcagaattctgagttcgaggccagcctggactccaaagtgagttccaggtcagccg 431

                                                                       
Query: 61  gggctatacagagaaactctgtcttgaaaaacaaaaaacaaaaaacaaacaaacaaaaaa 120
           ||||||||||||||||||||||||||       |||||||||||||||||||||||||||
Sbjct: 430 gggctatacagagaaactctgtcttg-------aaaaacaaaaaacaaacaaacaaaaaa 378

                                                                       
Query: 121 caccaacaagacaaagcccaaacatctttatcttagcaaggttgttctggagagcttctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caccaacaagacaaagcccaaacatctttatcttagcaaggttgttctggagagcttctt 318

                                                                       
Query: 181 gccaaattctatccctctgactgaaagacctccgtggggattccccgacctgagtcacga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 317 gccaaattctatccctctgactgaaagacctccgtggggattccccgacctcagtcacaa 258

                                                                       
Query: 241 gatagcatgcacccaaagaatcacaagaaactatctaactaaaa--acacaaggtagttt 298
           |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 257 gatagcgtgcacccaaagaatcacaagaaactatctaactaaaaacacacaaggtagttt 198

                                                                       
Query: 299 aatgacggagctccaggccgacacatatctcacgcaggagacagaggtgtcaacca-gga 357
           |||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| || 
Sbjct: 197 aatgacggagctccgggccaacacatatctcccgcaggagacagaggtgtcgaccatgg- 139

                                                                       
Query: 358 agctcagaagctaggggtttatataggaaaagagtgggggtaggataataattggttcag 417
           |||||||||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 138 agctcagaagctaggggtttatataggaaaagagtgggggtaagagaagaattggttcag 79

                                                                       
Query: 418 cttcacacaatgggacagtttaaacatcagcaaactgtacatgcagagcaaggtaacagc 477
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  cttcacataatgggacagtttaaacatcagcaaactgtacatgcagagcaaggtaacagc 19

                          
Query: 478 agggcatgtggtaac 492
           |||||||||||||||
Sbjct: 18  agggcatgtggtaac 4


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space:   687609
Effective search space used:   687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)