Query= MSMg01no271_b05.b1 MSMg01no271_b05.b1 CHROMAT_FILE:
MSMg01no271_b05.b1 PHD_FILE: MSMg01no271_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:52 2005
(646 letters)
>mm_chr5_44868981_44870026
Length = 1046
Score = 1218 bits (630), Expect = 0.0
Identities = 639/642 (99%)
Strand = Plus / Plus
Query: 5 gaattccatagactcagagaacccttgagcactgggtttcttcagtctaaagagactgac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatagactcagagaacccttgagcactgggtttcttcagtctaaagagactgac 264
Query: 65 caataagaaatgggctgaagggcagattagagaggcacattggcaagtggggagtttcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caataagaaatgggctgaagggcagattagagaggcacattggcaagtggggagtttcca 324
Query: 125 gataaagtttactcttgaggacagaggtgaagtaggatcagaaagaggttggcgaggaca 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 gataaagtttactcttgaggacagaggtgaagtaggatcagaaagaggttggtgaggaca 384
Query: 185 agagatagagggtggaaagggcaaggaagacagagtaggggagaggtcatagtgtctaga 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaagatagagggtggaaagggcaaggaagacagagtaggggagaggtcatagtgtctaga 444
Query: 245 agtcatagtgtcaagaaagggtcaggattcaacagagtcaaatgcctggtgacaatcatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtcatagtgtcaagaaagggtcaggattcaacagagtcaaatgcctggtgacaatcatg 504
Query: 305 agcatgggcagaggagccacaaggaatcatggcagatggtgacagcaggtgtttgtaagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agcatgggcagaggagccacaaggaatcatggcagatggtgacagcaggtgtttgtaagg 564
Query: 365 acagaagtatttgaaagtgacagtttaaccctgcagtgagaatttggaagcagaaaaggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acagaagtatttgaaagtgacagtttaaccctgcagtgagaatttggaagcagaaaaggc 624
Query: 425 catggttcagtttgaaaagaagcaaccattggtaaagaaggccgtgcagtctactctctt 484
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 catggttcagtttgaaaagaagcaaccattggtgaagaaggccgtgcagtctactctctt 684
Query: 485 cggacactaccttcaacactcagttttaaatatacagcatgcttctcccccttaccctca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cggacactaccttcaacactcagttttaaatatacagcatgcttctcccccttaccctca 744
Query: 545 agtagcctttgtctaggtccagaaataaaagcaagaggtcaagggtaaaaagaagtggga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agtagcctttgtctaggtccagaaataaaagcaagaggtcaagggtaaaaagaagtggga 804
Query: 605 tcaaaccagaggctggctcttcatggactaatgatgtatcag 646
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcaaaccagaggctggctcttcatggactaatgatgtatcag 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_b05.g1 MSMg01no271_b05.g1 CHROMAT_FILE:
MSMg01no271_b05.g1 PHD_FILE: MSMg01no271_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:53 2005
(292 letters)
>mm_chr5_44928817_44929509
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%), Gaps = 1/293 (0%)
Strand = Plus / Minus
Query: 1 agcacaacagaaaatgttttcttaattggggaccctttttgatttttggattccaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agcacaacagaaaatgttttcttaattggggaccctttttgatttttggattccaacaga 434
Query: 61 aaagcaggatatttttttcctttaaagaccaactttagataaaagctgcattaactctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaagcaggatatttttttcctttaaagaccaactttagataaaagctgcattaactctat 374
Query: 121 tgattaataagaatctacagatattttttgaagtgagaaaacattacttttactttatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgattaataagaatctacagatattttttgaagtgagaaaacattacttttactttatta 314
Query: 181 gctatgctta-ttttttatatttcctaacaaaggagacatacactcttccatatgtacct 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gctatgcttatttttttatatttcctaacaaaggagacatacactcttccatatgtacct 254
Query: 240 ctgttatggttcttggtggttgcatagaaaacaaaccacaaagctttggattt 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctgttatggttcttggtggttgcatagaaaacaaaccacaaagctttggattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
