XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATT
GTGCCTATAACCATAACATTTTGGTTGCTAAGCAATATAGGCTTCTTTTG
TGGACACCAGTGAGAAACTTGGCCAAGGATTTTTATTCCACATTTTAAAA
TTTTCTTTTGTATCTACTTAAATCCTACAGAAATAATGGAGGTGTATAAT
GGAAACAATCCCTTATGTGTAGAAAGGCCCAAAGACTCATCATTAGGCAT
AATCACTGTATGAATGGTTGTCTCATTAACCTGTTCTTATTTATATCATG
TGCACTCTGCTGAAATGGAAACAAATATAATTTACATTAAATAATAAGTT
TTTTTTGAACAGATTAAAAACTGAAGAGATTATGAAACATTTAAATGGTC
TTTAGGCTCGTGTGGCATAAAATGCCTTTGGATTTGTTTCAGTCTTTTGA
CTTCTTATACAAAAAAATGTAACTTAATATAATCCCTAAGTCTTGATGAC
CAATACGTATTCCTGTCTTGTTTGATTTGTTATCTACTTGGTATCAAGAC
TTTTATTCCTTTATTTACCTCCAAAAATATTTCCCAACAAATGTAAAAGT
CTTAGGAATACATTTCCCAGGAATAAGATGGAAAANTTGAAAGGGAAAAT
AATGTGTAAAATACAGAAACAGTAAATGGGAAAGATTTATTTTAAATCTA
AATTTGTTTAACTTGATCATTTGTAAACTTTACCTATTAATTATTAATGT
TTGTGCGCAC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTGGTTTAGTTCTATACCCCACTTTTTGATTTGT
TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGGTGTTTAGCTTCTTGA
GTTATTTATATATTTTTGATATTAGCTCTCTATCAGATGTGGGGTTAGTG
AAGATTTTTTCCCAATCTGTAGGTTGCCAACTTGTCTTATTGATTATGTC
CTTTATCTTACAGAGGCTTTCTAGTTTCATGAGGACCTATTTATCAATTC
TTAATCTTAGAGTATGAGTTATTAGAGTTCTATTTAGGAAATTTCACCCT
GTGCCAATGATTTCTTGGCTCCCCCCCCCTCTCTCTTATATTAGATTTAA
TATATCTGGTATCATGTTGAGGTTCTCGAACCACTTGGACTTGAGCTGTG
TGTAAGGTGACAAATAAGGGTCTATTTTTGTTTTTCTAACTAGCGACTGG
CAGTTATACTGCCACCATTTGTTGAAGATGCTTTCCTTTTTTTTCCATTG
TATATGTTTAGTTTCTTTGCCCAAGATCACGTGCCTGTAAATGTATTGTC
TAAATTATGATTCTTCTTTTCTACTCCTCGTTCTTTCATATCTATTCGAT
TCTCTTATTCTAAGCGTCCCGTTATCACATCAACTTTCCTAATCTTTAAA
TTATTTGACTTTTATTTGTTTATCTCTTATTTTTCACCTATCTTCACTTT
ATTTAAGTCTCCGATATTTATCN

Query= MSMg01no272_j05.b1 MSMg01no272_j05.b1 CHROMAT_FILE:
MSMg01no272_j05.b1 PHD_FILE: MSMg01no272_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:46 2005
         (641 letters)



>mm_chr5_69268132_69269171
          Length = 1040

 Score = 1127 bits (583), Expect = 0.0
 Identities = 625/639 (97%), Gaps = 5/639 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattgtgcctataac-cataacattttggttgctaagcaatataggcttcttttg 63
           ||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gaattcattgtgccta-gactcataacattttggttgctaagcaatataggcttcttttg 782

                                                                       
Query: 64  tggacaccagtgagaaacttggccaaggatttttattccacattttaaaattttcttttg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tggacaccagtgagaaacttggccaaggatttttattccacattttaaaattttcttttg 722

                                                                       
Query: 124 tatctacttaaatcctacagaaataatggaggtgtataatggaaacaatcccttatgtgt 183
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 721 aatctacttaaatcctacagaaataatggaggtgtataatagaaacaatcccttatgtgt 662

                                                                       
Query: 184 agaaaggcccaaagactcatcattaggcataatcactgtatgaatggttgtctcattaac 243
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 661 agaaaggcccaaagactcatcattaggcataatcactgtaagaatggttgtctcattaac 602

                                                                       
Query: 244 ctgttcttatttatatcatgtgcactctgctgaaatggaaacaaatataatttacattaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgttcttatttatatcatgtgcactctgctgaaatggaaacaaatataatttacattaa 542

                                                                       
Query: 304 ataataagttttttttgaacagattaaaaactgaagagattatgaaacatttaaatggtc 363
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataataagctttttttgaacagattaaaaactgaagagattatgaaacatttaaatggtc 482

                                                                       
Query: 364 tttaggctcgtgtggcataaaatgcctttggatttgtttcagtcttttgacttcttatac 423
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 481 tttaggctcgtgtggcataaaatgcctttggatttatttcagtcttttgacttcttatac 422

                                                                       
Query: 424 aaaaaaatgtaacttaatataatccctaagtcttgatgaccaatacgtattcctgtcttg 483
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 421 aaaaaaatgtaacttaatataatccctaagttttgatgaccaatacgtattcctgtcttg 362

                                                                       
Query: 484 tttgatttgttatctacttggtatcaagacttttattcctttatttacctccaaaaatat 543
           || |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 ttcgatttgttttctacttggtatcaagacttttattccttt-tttacctccaaaaatat 303

                                                                       
Query: 544 ttcccaacaaatgtaaaagtcttaggaatacatttcccaggaataagatggaaaanttg- 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 302 ttcccaacaaatgtaaaagtcttaggaatacatttcccaggaataagatggaaaa-ttga 244

                                                  
Query: 603 aaagggaaaataatgtgtaaaatacagaaacagtaaatg 641
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaagggaaaataatgtgtaaaatacagaaacagtaaatg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1040
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1030
Effective search space:   649930
Effective search space used:   649930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)