Query= MSMg01no273_k14.b1 MSMg01no273_k14.b1 CHROMAT_FILE:
MSMg01no273_k14.b1 PHD_FILE: MSMg01no273_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:04 2005
(320 letters)
>mm_chr5_74878482_74879201
Length = 720
Score = 590 bits (305), Expect = e-173
Identities = 311/313 (99%)
Strand = Plus / Plus
Query: 5 gaattcttgtacagattgtcaatgcacttcctaacaggcagacttcctggtgagtaagaa 64
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcttgtacagattgtcaatgtacttcctaacaagcagacttcctggtgagtaagaa 264
Query: 65 tgagggcttgcactcggtggcaggcactgaagtattccactccaggcattcagcaggaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgagggcttgcactcggtggcaggcactgaagtattccactccaggcattcagcaggaag 324
Query: 125 gatggcccttagggaagcctttacaatcatctgttgatagcagcccaagcactgcattat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatggcccttagggaagcctttacaatcatctgttgatagcagcccaagcactgcattat 384
Query: 185 gcagggtctcatctgggttcatttcccagtagctctctgtctcatctgccatgtcgtgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagggtctcatctgggttcatttcccagtagctctctgtctcatctgccatgtcgtgtc 444
Query: 245 cctgttataaatgagcacagtgttcttcccggaaggcagcggccacaaagccaagtatac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctgttataaatgagcacagtgttcttcccggaaggcagcggccacaaagccaagtatac 504
Query: 305 gcatttgtaataa 317
|||||||||||||
Sbjct: 505 gcatttgtaataa 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_k14.g1 MSMg01no273_k14.g1 CHROMAT_FILE:
MSMg01no273_k14.g1 PHD_FILE: MSMg01no273_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:04 2005
(290 letters)
>mm_chr5_75029770_75030454
Length = 685
Score = 476 bits (246), Expect = e-139
Identities = 277/290 (95%), Gaps = 5/290 (1%)
Strand = Plus / Minus
Query: 1 tacgtgaggaactgagtcacatttggatcagaagtgaacggtgagaggtagtgaggagat 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 485 tacgtgaggaactgagtcacatttggatcagaagtgaacggagagaggtagtgaggagat 426
Query: 61 cagctcaaaggagagttgcatagctatcataagtgggtcaggtcacagatagcgaggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 425 cagctcaaaggagagttgcatagctatcataagtgggtcaggtcacagacagcaaggagc 366
Query: 121 ccttccctacaggtgagtttgcactaaccagcaggctgaattgtgtgaaggacacccccc 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccttccctagaggtgagtttgcactaaccagcaggctgaattgtgtgaaggacacccccc 306
Query: 181 ttaggatatttgcaaaccacgtctgaggactatccggagccttatgtcctactcccatta 240
|| |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||
Sbjct: 305 ttgggatatttgcaaactacgtctgaggact-----gagccttgtgtcctactcccatta 251
Query: 241 gcaactcacaccaaagacttggaaatttcctaggaagaggtttccttttc 290
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcaactcataccaaagacttggaaatttcctaggaagaggtttccttttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 685
Length adjustment: 9
Effective length of query: 281
Effective length of database: 676
Effective search space: 189956
Effective search space used: 189956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
