Query= MSMg01no274_g08.b1 MSMg01no274_g08.b1 CHROMAT_FILE:
MSMg01no274_g08.b1 PHD_FILE: MSMg01no274_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:55 2005
(234 letters)
>mm_chr5_134206315_134206948
Length = 634
Score = 420 bits (217), Expect = e-122
Identities = 229/233 (98%)
Strand = Plus / Minus
Query: 1 aacacccaccaaagcatcctgctatcccagctgactggctggggagtttgccttttgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aacacccaccaaagcatcctgctatcccagctgactggctggggagtttgccttttgatt 374
Query: 61 tttccgctgaaatatcttctattgcctttgtgtgcccttgcatgcatgtgtgtatgtgtg 120
|| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttgccgctgaaatatcttttattgcctttgtgtgcccttgcatgcatgtgtgtatgtgtg 314
Query: 121 tgaaatgacgaacttgctcattttcaagcttctttcttagttataaactttccttcccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tgaaatgacgaacttgctcattttcaagcttctttcttagttataaactttccttcccta 254
Query: 181 actccaccaatacaacctcgaggaaagaaaagaaaatcagtcatgaaaattta 233
||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 253 actccaccaatacaaccacgtggaaagaaaagaaaatcagtcatgaaaattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_g08.g1 MSMg01no274_g08.g1 CHROMAT_FILE:
MSMg01no274_g08.g1 PHD_FILE: MSMg01no274_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:55 2005
(229 letters)
>mm_chr5_134055036_134055665
Length = 630
Score = 398 bits (206), Expect = e-115
Identities = 224/232 (96%), Gaps = 5/232 (2%)
Strand = Plus / Plus
Query: 1 agatacttaggtccctgatcggccattcagcatcagaattccagaggtgagagctcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatacttaggtccctgatcggccattcagcatcagaattccagaggtgagagctcagag 260
Query: 61 atctatttttttaaacgctctggatgctaagactgaatgatcctaacaggaaagcttagc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctatttttttaaaccctctggatgctaagactgaatgatcctaacaggaaagcttagc 320
Query: 121 cctcccgcatctatttagtgcaatatggaacccctgcaccattctcaggctatttgtttt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 cctcccgcatctatttagtgcaatatggaacccctgcaccgttctcaggctatttgtttt 380
Query: 181 ttaatgattgatgattctta---tagcagtaactcatatctccccaggccag 229
|||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 381 ttaatgattgatgaatc--aatctagcagtaactcatatctccccaggccag 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
