Query= MSMg01no276_o07.b1 MSMg01no276_o07.b1 CHROMAT_FILE:
MSMg01no276_o07.b1 PHD_FILE: MSMg01no276_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:55 2005
(312 letters)
>mm_chr5_102766750_102767461
Length = 712
Score = 516 bits (267), Expect = e-151
Identities = 297/307 (96%)
Strand = Plus / Minus
Query: 5 gaattccactatgccttgtcctcatgacagagaagctcagtcacccccacagacatggca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaattccactatgctttgtcctcatgacagagaagctcagtcacccccacagacatggca 452
Query: 65 gctgtgaaggacacacatcgcacactcgtcctgaatagcctaggtgctcggatagcaaaa 124
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 451 gctgtgaaggagacacatcgcacactcgtcctgaatagcctaggcgctcggatagcaaaa 392
Query: 125 taacagaacgatagcgagccttcaggaagtaaagaaggagtatcctcgctttgtgtatta 184
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 391 taacagaacgatagcgagccttcagaaagtaaagaaggagtatcctcgcttagtgtatta 332
Query: 185 gctacctgaatattaagcgcacgctaggggttctgttctgtctctcatctgactgctgta 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 331 gctacctgaatattaagcgcacgctaggggctctgttctgtctctcatctgactgctgta 272
Query: 245 atggagtcctcctaagcatctgaggccacttatggcgaggaagacagcgatttacatatt 304
||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||
Sbjct: 271 atggagtcctcctaagcatctgaggccacagagggcaaggaagacagcgatttacatatt 212
Query: 305 gcgttga 311
|||||||
Sbjct: 211 gcgttga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_o07.g1 MSMg01no276_o07.g1 CHROMAT_FILE:
MSMg01no276_o07.g1 PHD_FILE: MSMg01no276_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:55 2005
(282 letters)
>mm_chr5_102643404_102644085
Length = 682
Score = 449 bits (232), Expect = e-130
Identities = 262/272 (96%), Gaps = 2/272 (0%)
Strand = Plus / Plus
Query: 1 cagtgtcagattccttcaggtacatgcccagaggtgatgcagctggatcacgtggctggt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgtcagattccttcaggtacgtgcccagaggtgatgcagctggatcacgtggctggt 260
Query: 61 ggtgtggtgcagctggatcacgtggctggtggtgtggtgcagctggatcacgtggctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgtggtgcagctggatcacgtggctggtggtgtggtgcagctggatcacgtggctggt 320
Query: 121 ggtgtg-gtgcagctggatcacgtggctggtggttcagtgcagctggatcacgtggctgg 179
||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 ggt-tcagtgcagctggatcacgtggctggtggttctgtgcagctggatcacgtggctgg 379
Query: 180 tggttctgtgcagctggatcacgtggctggtggttcggtgtagttggatcacgtggctgg 239
|||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 380 tggttcggtgtagttggatcacgtggctggtggttcggtgtagttggatcatgtggctgg 439
Query: 240 tggttcggtgtagttggatcatgtggctggtg 271
||||||||||||||||||||| ||||||||||
Sbjct: 440 tggttcggtgtagttggatcacgtggctggtg 471
Score = 296 bits (153), Expect = 1e-84
Identities = 177/185 (95%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 98 tgcagctggatcacgtggctggtggtgtggtgcagctggatcacgtggctggtggt-tca 156
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 238 tgcagctggatcacgtggctggtggtgtggtgcagctggatcacgtggctggtggtgtg- 296
Query: 157 gtgcagctggatcacgtggctggtggttctgtgcagctggatcacgtggctggtggttcg 216
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 297 gtgcagctggatcacgtggctggtggttcagtgcagctggatcacgtggctggtggttct 356
Query: 217 gtgtagttggatcacgtggctggtggttcggtgtagttggatcatgtggctggtggttcg 276
||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 357 gtgcagctggatcacgtggctggtggttcggtgtagttggatcacgtggctggtggttcg 416
Query: 277 gtgta 281
|||||
Sbjct: 417 gtgta 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 3
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
