NNNNNNNNNNNNNNNGGGGCCCGCCGGGCCACCGGAGAGGANAGGGTCAA
AAATTGCGGCGCCGATAGATCNNTANAATCGGGAAAGNNGGANNNNNNNN
NNGAGTAACAAAAAAAGGGGAGNNNNNNNGNNNNNNGNNNNNNGGNNNNN
NNNNNNNGGTTTACCCCCATGAAAAGAAGGGTGAGATTNNANTTGAGTNN
AGTGAGAATGGNTAAGATNAAAAATTNAGGTGANAGTAGATGGTGGNGAG
GATGTGGAGAAAGGGGAANANTNNTNNATTGTTGGTGGGATTGTATGTTT
GTANAANNANTATGGAAATGAGTNTGGNAGTTGNTGAGAAAATTGGANAT
AGNANNANGGGATTTTTTTTTTTTTANNNNNNNNGGGGANAGGAANAGAA
GAGGTTTTTTTTTTACCACGGACACATGCTCCACTATGTTCATAGCATCC
TTGGTTATAATAGCCAGAAGAAGGAAAGAACCGAGAGGGGGGGGAGGAGA
GGAATGGATACAGAAAATGTAGTACATTTACACAATGGAAGACTACTCAG
CTATCAAAAAAATGAATTTATGAAATTCCTAGGGAAAAGGATGGACCTGG
AGGGAAACATCCTGAGTGAGGGAAACAAATCAAAAAGGAAATCGTAAAAT
ATGTACTCAATGGGAAGGGGAGAATAAGGCAAGAAAATGAGAAAAAACCA
GGAAATATTATATTATTTGGCACAAGGGACGAAAATGCGGGAAGAAGGAA
GAACNACGGCGGGGGAGACTTTAACGTTGTCGTAGGAATAGGGGAAC

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTAAATACTTAGTAAAAATTTGC
AGATTTGGGGACAGTAGATACAACCAGCCTGAGGTCCTGGCAAGTCCTAG
ACTCTAGGCACAGTTCAGGGGCTGTCAGGGGGATGGCTGACATCTGCTGA
AAGCCTGAGGCACACATGTGAGAGGTAAGAGTCAGTCTATGTCAGGCTAA
TCACTGTTTTCCTTTGTATTCTCTAAACCTTTGTCTCCTCCCTACAATTC
AAAACCCTGACTCCACATCCTGTTAATTAAGATCTCTGATTCAGAGATCA
TAAGCCACTGTAAGTACCACAGCGACCTGACCTTTGAGCTTTACTAATGA
AGCTAGAAAATGCTGTGCTAGGGGAAACATGGTGAACAACTCACTTGACA
CAGAAACCCTGTGGTTTTGTGTTGAGCACTTACTGTAGAGAATCTAGGGT
TGAGGAAAGGAGTCAGAAGGCAATGGCACAAAAGCAAGATGGCACTCTGG
AGACATCTGGAAGGCAGCTACGGGATTTGCTTGTGGGAGGCATGTGGGGC
TAGGCAAGGGAGATGGCCAGTGCTTAACTAGGGATATGGGTGGGTTCTGG
GCTGTACTCTGGTGAGAGATGGCCAACTAGTTTTATTAAAGATCTGACAT
TGTACTACTGTTAGTTAGGGTAGTCAGGGCAGCAAGTGGTTTCTN

Query= MSMg01no277_c01.g1 MSMg01no277_c01.g1 CHROMAT_FILE:
MSMg01no277_c01.g1 PHD_FILE: MSMg01no277_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:12 2005
         (662 letters)



>mm_chr5_90546225_90547286
          Length = 1062

 Score = 1241 bits (642), Expect = 0.0
 Identities = 657/662 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attaaatacttagtaaaaatttgcagatttggggacagtagatacaaccagcctgaggtc 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 attaaatacttagtaaaactttgcagatttggggacagtagatacaaccagcctgaggtc 803

                                                                       
Query: 61  ctggcaagtcctagactctaggcacagttcaggggctgtcagggggatggctgacatctg 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 802 ctggcaagtcctagactctaggcacagttcaggggctgtcaggggcatggctgacatctg 743

                                                                       
Query: 121 ctgaaagcctgaggcacacatgtgagaggtaagagtcagtctatgtcaggctaatcactg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ctgaaagcctgaggcacacatgtgagaggtaagagtcagtctatgtcaggctaatcactg 683

                                                                       
Query: 181 ttttcctttgtattctctaaacctttgtctcctccctacaattcaaaaccctgactccac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 682 ttttcctttgtattctctaaacctttgtctcctccctacaattcaaaaccctgactccat 623

                                                                       
Query: 241 atcctgttaattaagatctctgattcagagatcataagccactgtaagtaccacagcgac 300
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 622 atcctgttaattaagatctctgattcagagagcataagccactgtaagtaccacagcgac 563

                                                                       
Query: 301 ctgacctttgagctttactaatgaagctagaaaatgctgtgctaggggaaacatggtgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctgacctttgagctttactaatgaagctagaaaatgctgtgctaggggaaacatggtgaa 503

                                                                       
Query: 361 caactcacttgacacagaaaccctgtggttttgtgttgagcacttactgtagagaatcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 caactcacttgacacagaaaccctgtggttttgtgttgagcacttactgtagagaatcta 443

                                                                       
Query: 421 gggttgaggaaaggagtcagaaggcaatggcacaaaagcaagatggcactctggagacat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gggttgaggaaaggagtcagaaggcaatggcacaaaagcaagatggcactctggagacat 383

                                                                       
Query: 481 ctggaaggcagctacgggatttgcttgtgggaggcatgtggggctaggcaagggagatgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctggaaggcagctacgggatttgcttgtgggaggcatgtggggctaggcaagggagatgg 323

                                                                       
Query: 541 ccagtgcttaactagggatatgggtgggttctgggctgtactctggtgagagatggccaa 600
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 322 ccagtgcttaactagggatatgggtgggttctgggctgtactatggtgagagatggccaa 263

                                                                       
Query: 601 ctagttttattaaagatctgacattgtactactgttagttagggtagtcagggcagcaag 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctagttttattaaagatctgacattgtactactgttagttagggtagtcagggcagcaag 203

             
Query: 661 tg 662
           ||
Sbjct: 202 tg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)