Query= MSMg01no279_l10.b1 MSMg01no279_l10.b1 CHROMAT_FILE:
MSMg01no279_l10.b1 PHD_FILE: MSMg01no279_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:23 2005
(323 letters)
>mm_chr5_53027596_53028319
Length = 724
Score = 603 bits (312), Expect = e-177
Identities = 318/320 (99%), Gaps = 1/320 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgccccttctgtcctccatgacagactgtggttagaagcctaagatgaaataa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaattcctgccccttctgtcctccatgacagactgtggttagaagcctaagatgaaataa 587
Query: 65 actcttcccgtagattgctttaggtcagagggttttatcaccacagcaggaaagcaaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 actcttcccgtagattgctttaggtcagagggttttatcaccacagcaggaaagcaaact 527
Query: 125 agatcactaagcgacctgaccttccgaaagctaacttttgactcatctgaaaggataaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agatcactaagcgacctgaccttccgaaagctaacttttgactcatctgaaaggataaca 467
Query: 185 agacctcccgggactgagataaacatccagtgaaattttatgtgtgggaagtggctgggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agacctcccgggactgagataaacatccagtgaaattttatgtgtgggaagtggctgggg 407
Query: 245 gagggaggacggatatgtagcccctggtctgataggagctatcactgaatggttggtaac 304
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gagggaggatggatatgtagcccctggtctgataggagctatcactgaatggttggtaac 347
Query: 305 acaacacacc-aaaatggaa 323
|||||||||| |||||||||
Sbjct: 346 acaacacaccaaaaatggaa 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_l10.g1 MSMg01no279_l10.g1 CHROMAT_FILE:
MSMg01no279_l10.g1 PHD_FILE: MSMg01no279_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:23 2005
(281 letters)
>mm_chr5_52890284_52890966
Length = 683
Score = 493 bits (255), Expect = e-144
Identities = 274/281 (97%), Gaps = 2/281 (0%)
Strand = Plus / Plus
Query: 1 agatgatgactgtgtgaaaaggggcgttccaacactgatgtcattctcttttatatggga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 201 agatgatgactgtgtgaaaaggggcgttccaacacggatgtcattctcttttatatgaga 260
Query: 61 tccgtgatggacatatgttgtttggggatggccacaaagcatcctgga--tttttttccc 118
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 261 tccgtgatggacatatgttgtttggggatggccacaaagcatcctggattttttttttcc 320
Query: 119 taagaaatggtcatgaagatgattattctctacactgctgtaaagttgtatctttctttc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagaaatggtcatgaagatgattattctctacactgctgtaaagttgtatctttctttc 380
Query: 179 tgtggtctgatacgatcagcagcaggcacatgacccaaccttggccacactatactctct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtggtctgatacgatcagcagcaggcacatgacccaaccttggccacactatactctct 440
Query: 239 tttctggaacttgggattcaaagccacgtcaatgcacacat 279
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 gttctggaacttgggattcaaagccacgccaatgcacacat 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 683
Length adjustment: 9
Effective length of query: 272
Effective length of database: 674
Effective search space: 183328
Effective search space used: 183328
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
