Query= MSMg01no280_k08.b1 MSMg01no280_k08.b1 CHROMAT_FILE:
MSMg01no280_k08.b1 PHD_FILE: MSMg01no280_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:32 2005
(327 letters)
>mm_chr5_74878482_74879207
Length = 726
Score = 567 bits (293), Expect = e-166
Identities = 314/321 (97%), Gaps = 1/321 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgtacagattgccaatgcacttcctaacaggcagacttcctggtgagtaagaa 64
|||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcttgtacagattgtcaatgtacttcctaacaagcagacttcctggtgagtaagaa 264
Query: 65 tgagggcttgtctctccgcggcaggcactgaagtattccactccaggcattcagcaggaa 124
|||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgagggcttg-cactcggtggcaggcactgaagtattccactccaggcattcagcaggaa 323
Query: 125 ggatggcccttagggaagcctttacaatcatctgttgatagcagcccaagcactgcatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggatggcccttagggaagcctttacaatcatctgttgatagcagcccaagcactgcatta 383
Query: 185 tgcagggtctcatctgggttcatttcccagtagctctctgtctcatctgccatgtcgtgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcagggtctcatctgggttcatttcccagtagctctctgtctcatctgccatgtcgtgt 443
Query: 245 ccctgttataaatgagcacagtgttcttcccggaaggcagcggccacaaagccaagtata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccctgttataaatgagcacagtgttcttcccggaaggcagcggccacaaagccaagtata 503
Query: 305 cgcatttgtaataacgttttc 325
|||||||||||||||||||||
Sbjct: 504 cgcatttgtaataacgttttc 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 726
Length adjustment: 9
Effective length of query: 318
Effective length of database: 717
Effective search space: 228006
Effective search space used: 228006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_k08.g1 MSMg01no280_k08.g1 CHROMAT_FILE:
MSMg01no280_k08.g1 PHD_FILE: MSMg01no280_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:32 2005
(244 letters)
>mm_chr5_75029764_75030402
Length = 639
Score = 395 bits (204), Expect = e-114
Identities = 232/244 (95%), Gaps = 5/244 (2%)
Strand = Plus / Minus
Query: 1 gaggagatcagctcaaaggagagttgcatagctatcataagtgggtcaggtcacagatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 439 gaggagatcagctcaaaggagagttgcatagctatcataagtgggtcaggtcacagacag 380
Query: 61 cgaggagcccttccctacaggtgagtttgcactaaccagcaggctgaattgtgtgaagga 120
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 caaggagcccttccctagaggtgagtttgcactaaccagcaggctgaattgtgtgaagga 320
Query: 121 caccccccttaggatatttgcaaaccacgtctgaggactatccggagccttatgtcctac 180
|||||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||
Sbjct: 319 caccccccttgggatatttgcaaactacgtctgaggact-----gagccttgtgtcctac 265
Query: 181 tcccattagcaactcacaccaaagacttggaaatttcctaggaagaggtttccttttctc 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcccattagcaactcataccaaagacttggaaatttcctaggaagaggtttccttttctc 205
Query: 241 tact 244
||||
Sbjct: 204 tact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 639
Length adjustment: 9
Effective length of query: 235
Effective length of database: 630
Effective search space: 148050
Effective search space used: 148050
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
