Query= MSMg01no290_g09.b1 MSMg01no290_g09.b1 CHROMAT_FILE:
MSMg01no290_g09.b1 PHD_FILE: MSMg01no290_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:56 2005
(386 letters)
>mm_chr5_118662617_118663400
Length = 784
Score = 497 bits (257), Expect = e-145
Identities = 363/417 (87%), Gaps = 36/417 (8%)
Strand = Plus / Minus
Query: 1 attgctagccgg--gtggtggtg---gcctttaatcccagcacttgggaggtagacccag 55
|||||||||||| ||||||| | |||||||||||||||||| |||||| ||| |||
Sbjct: 659 attgctagccgggcgtggtggcgcatgcctttaatcccagcactggggaggcagaggcag 600
Query: 56 gtggatttgtgagttccaggccagcctggtctacagagtgagttccaggacagccagggc 115
|||||||| ||||||| | |||||||||||||||||||||||||| | ||||||||||||
Sbjct: 599 gtggatttctgagttcgaagccagcctggtctacagagtgagttcta-gacagccagggc 541
Query: 116 tacacagagaaaccctgtttaaaaaaaaataaacaaaacaaaacaaaaaaagtattgcta 175
|||||||||||||||||| | ||| | |||||||||||||| ||||||||||||||
Sbjct: 540 tacacagagaaaccctgtct--caaagagcaaacaaaacaaaac--aaaaagtattgcta 485
Query: 176 ctggcttccatcatcttaacaaatctgctaagtccagcaattttttttttaagctgagag 235
|||||||||||| |||||||| | ||||||||||||||||||||||||| ||||||||||
Sbjct: 484 ctggcttccatcgtcttaacatacctgctaagtccagcaatttttttttcaagctgagag 425
Query: 236 acttggagcaggttcccttaccactctatgcctctggcactgactctgtatgagagtgtc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 acttggagcaggttcccttaccactctatgcctctggcactgactctgtatgagagtgtc 365
Query: 296 agctgtag-------ttggactttggt-----------tacttgtttaattccatccttc 337
|||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 364 agctgtagttggactttggactttggttactttgtgggtacttgtttaattccatccttc 305
Query: 338 tccatttctctt--------cttccaacccctaacacgaggtaggagagaagggata 386
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 304 tccatttctcttcttccacccttccaacccctaacacgaggtaggagagaagggata 248
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 784
Length adjustment: 9
Effective length of query: 377
Effective length of database: 775
Effective search space: 292175
Effective search space used: 292175
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_g09.g1 MSMg01no290_g09.g1 CHROMAT_FILE:
MSMg01no290_g09.g1 PHD_FILE: MSMg01no290_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:56 2005
(232 letters)
>mm_chr5_118496375_118497006
Length = 632
Score = 414 bits (214), Expect = e-120
Identities = 226/230 (98%)
Strand = Plus / Plus
Query: 1 gttctacaggaacaggcactcgcaggggaaaccacccaggcctgctcaacctttatgtct 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 gttctacaggaacaggcactcgcaggggaagccacccaggcctgctcaacctttatgtcg 260
Query: 61 tgtgtgatctggacttgtcctgaagttcccccgatgctgagcgcctgctggagcctccct 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgtgatctggacttgtactgaagttcccccgatgctgagcgcctgctggagcctccct 320
Query: 121 gatgctgggagtctgagggtctactgatagagctggcattgccctgatgggtctatctct 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgatgggagtctgagggtctactgatagagctggcattgccctgatgggtctatctct 380
Query: 181 agactttacttcctctgggtcattccagccttggacaagatgaggctgtc 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactttacttcctctgggtcattccagccttggacaagatgaggctgtc 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
