Query= MSMg01no291_d17.b1 MSMg01no291_d17.b1 CHROMAT_FILE:
MSMg01no291_d17.b1 PHD_FILE: MSMg01no291_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:58 2005
(328 letters)
>mm_chr5_126545502_126546229
Length = 728
Score = 611 bits (316), Expect = e-179
Identities = 325/328 (99%), Gaps = 1/328 (0%)
Strand = Plus / Minus
Query: 1 ttgatttaaattaaaaaaaaattaagtttaaatttctgccgagtggcttaattgggattt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttgatttaaatt-aaaaaaaattaagtttaaatttctgccgagtggcttaattgggattt 504
Query: 61 tttttaatggaatttgtcttatttaaccctctgatagaaaagagagaatgttttgttgac 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 503 tttttaatggaatttgtcttatttaaccctttgatagaaaagagagaatgttttgttgac 444
Query: 121 acttcccacgttgtaggaaaccctccagccaacagcactggctccaactccgcttatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acttcccacgttgtaggaaaccctccagccaacagcactggctccaactccgcttatact 384
Query: 181 taaaggaaacctttgttctaagtttcttcatgacgagccatttggaaggttttgagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 taaaggaaacctttgttctaagtttcttcatgacgagccatttggaaggttttgagagga 324
Query: 241 aagaaggttggtgctaactccatcttgggacttcctgagaaccaggcatgaggagatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aagaaggttggtgctaactccatcttgggacttcctgagaaccaggcatgaggagatcat 264
Query: 301 ggctcccaaggagtactgagaggagcct 328
||||||||||||||| ||||||||||||
Sbjct: 263 ggctcccaaggagtattgagaggagcct 236
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_d17.g1 MSMg01no291_d17.g1 CHROMAT_FILE:
MSMg01no291_d17.g1 PHD_FILE: MSMg01no291_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:58 2005
(603 letters)
>mm_chr5_126383797_126384797
Length = 1001
Score = 1073 bits (555), Expect = 0.0
Identities = 590/603 (97%), Gaps = 5/603 (0%)
Strand = Plus / Plus
Query: 1 aaaatgcagaataaaaaaaaatttgaagtgggatactgcaataaaattacaagaacaaaa 60
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaaatgcggaataaaaaa---tttgaagtgggatactgcaataaaattacaagaacaaaa 260
Query: 61 accaaactcaaacccaaatccccaaatacctcttgtaagaaaagggggcaggcaatggtg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 accaaactcaaacccaaatccccaaatacctcttgtaagcaaagggggcaggcaatggtg 320
Query: 121 gcacgtgtctttaatcccagaacttgaaaggcagaggcaggcacatccttgagttcaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcacgtgtctttaatcccagaacttgaaaggcagaggcaggcacatccttgagttcaagg 380
Query: 181 ccagcctgttctacagagtgagttccaggacagccagggctacacagtgagaacatgtct 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 ccagcctgttctacagagtgagttccaggacagccagggcaacacagtgagaacatgtct 440
Query: 241 tgaaaaaccagaaaacaaacaactcaacatcaacagtagggaagaactgggcgcataaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 441 tgaaaaaccagaaaacaaacaactcaacatcaacagtagggaagaactgggcggacaaat 500
Query: 301 aggctatcaggagaaaattggcttctttgatcggtttgcgtttgctcttcgaaggtttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggctatcaggagaaaattggcttctttgatcggtttgcgtttgctcttcgaaggtttag 560
Query: 361 ggccagttttacagcatgttgataattcattttcctgaatcttattattatttttttctt 420
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 561 ggccagttttacagcatgttgataattcattttcctgaatcttatt-tt-tttttttctt 618
Query: 421 ttggaccttgagatatctaatgagctctgagaacggggcatctatttcccttgaccagat 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttggaccttgaaatatctaatgagctctgagaacggggcatctatttcccttgaccagat 678
Query: 481 gatgaatgtctgtgctgtttgaattaagcttcttcagcccaagtggcaggaggcatgtgt 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gatgaatgtctgtgctgtctgaattaagcttcttcagcccaagtggcaggaggcatgtgt 738
Query: 541 ggctctcttaagcaacagagaggttattggagcaatgcctagtggctggttccaaaattt 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 739 ggctctcttaagcaacagagaggttattggagcaatgcctagtggccggttccaaaattt 798
Query: 601 gac 603
|||
Sbjct: 799 gac 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1001
Length adjustment: 10
Effective length of query: 593
Effective length of database: 991
Effective search space: 587663
Effective search space used: 587663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
