TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCCCTGCTTCCCATTTGAGAGCCTGTGCACAGGGGATGGGTTGGCC
TCTCCCTTGCCCCCACCCCCACCCCGTGGCTCTCGAGTCATTCTTGCCTA
AAGGCAGGTGGGTATCTAGAAGTCTTTCACAAAGGGCTCCAGGGGAACCC
AGGAAGCTGTCAGCACAGACCTGGAGCCGAAGGGGTCAGCCTGGAAGTAA
TCCACTGGCGTGTGGCTTCTCCCGGACAACAGATCCTAGGCCCACCACAG
GCTTGCTGTTGTAAGACAAGGCAACCTTTGAACCAATTTAAGAGGTAGAT
TTTTCAGCCGGCAAAGCCAGTGCACATACACAGAAGAGTTTTAGAGCCCA
GTGGAGGCTGAGTCACCCACACAGGACGGCTGGCTCATGAGACATCTCCC
CGACTTGAAGGCTTCCAGGCCAAGAAGAGATTTGTAATCCGTGCAACACA
GAAATAGCAGCCATGCCCCCACTAGCTCTCCCATCTCAGGAAGGCCTTCC
TCATCTCACACTAGTGAGACCTGTCCTCACCACTCATCCTCTCCCTCTGC
GGCCTGCACATTCTCCGACCCAGTCTTTCCACTTCAGAATGATGGAGTGT
CTCCTTCTAAGGGACTTTGGCCTCTCACAGGGAGGAAGACACGTGCCCAG
TAGGCCCTAAGGAAATGCT

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGCACCTGCCAAGCCAGCCTGGGA
GTTGGGCTAGAGTCTATATAAGACCAAAGTCCTATCCACAGTCCCACCCC
CTAGACCAGAGATTGAAATTTTGGGGTGCATCAGAGTCCATGTCAGATGC
TGAGCCCACTCCATCTCCAGTCCTAGGTAGCTGAGGAACATTGTGTTGAT
AGCACAAACACTAGATACTGCGGTTGCAAGTGCTCATGGGTGGAAATCAT
ACTAGACCTGGGTGGGGTCTGGTGACAGACCCTGCTCACTCCCCATGCCA
AGTGAAGAGAACTGTTTGGTGCTCACGCCCCCAGAGCCAGTGCCTCTCCT
CCCACGGGAGAACTTGCCCCCCACTTCATAAGTCTCCAGCTCTGATGTGT
AGAGAGGCTGTGGAATGACCCAGGAGCCTCTGTATGGATCCTGTGTAGGC
TATCACCACACAGCATTTAGGATAATATGCAGAATTTAGGCTCCCCCATC
AGTGTGGCAGCTTGGTGCTGAGGGCTGGTGATGGACAAAGCAACTGCAGC
TCGTTCAGTACCCATCACTCTGTTCTGAGAGAAGGCTCCGTTAGCCTATA
TTATAGATTAAGGAAACAGAGGCTAGGCAAGCTCTGGCTACACACACAGA
AGTAATGGCGCATGTCCGC

Query= MSMg01no291_l17.b1 MSMg01no291_l17.b1 CHROMAT_FILE:
MSMg01no291_l17.b1 PHD_FILE: MSMg01no291_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:36 2005
         (622 letters)



>mm_chr5_53747878_53748899
          Length = 1022

 Score = 1089 bits (563), Expect = 0.0
 Identities = 605/619 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   gagagcctgtgcacaggggatgggttggcctctcccttgcccccacccccaccccgtggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gagagcctgtgcacaggggatgggttggcctctcccttgcccccacccccaccccgtggc 760

                                                                       
Query: 61  tctcgagtcattcttgcctaaaggcaggtgggtatctagaagtctttcacaaagggctcc 120
           |||| |||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 759 tctccagtcattcttccctaaaggcagatgggtatctagaagtctttcacaaacggctcc 700

                                                                       
Query: 121 aggggaacccaggaagctgtcagcacagacctggagccgaaggggtcagcctggaagtaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aggggaacccaggaagctgtcagcacagacctggagccgaaggggtcagcctggaagtaa 640

                                                                       
Query: 181 tccactggcgtgtggcttctcccggacaacagatcctaggcccaccacaggcttgctgtt 240
           ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 639 tccactggcgtgtggcttctccccgaaaatagatcctaggcccaccacaggcttgctgtt 580

                                                                       
Query: 241 gtaagacaaggcaacctttgaaccaatttaagaggtagatttttcagccggcaaagccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gtaagacaaggcaacctttgaaccaatttaagaggtagatttttcagccggcaaagccag 520

                                                                       
Query: 301 tgcacatacacagaagagttttagagcccagtggaggctgagtcacccacacaggacggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 519 tgcacatacacagaagagttttagagcccagtggaggctgagtcaccaagagaggacggc 460

                                                                       
Query: 361 tggctcatgagacatctccccgacttgaaggcttccaggccaagaagagatttgtaatcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 459 tggctcatgagacatctccccgacttgaaggcttccaggccaagaagagatttgtaaccc 400

                                                                       
Query: 421 gtgcaacacagaaatagcagccatgcccccactagctctcccatctcaggaaggccttcc 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 399 gtgcaacacagaaatagcagccatgcccccactagctctcccatctcaggaaggcctttc 340

                                                                       
Query: 481 tcatctcacactagtgagacctgtcctcaccactcatcctctccctctgcggcctgcaca 540
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 339 tcatctcacaccagtgagacctgtcctcaccactcatcctctccctctgcggcctacaca 280

                                                                       
Query: 541 ttctccgacccagtctttccacttcagaatgatggagtgtctccttctaagggactttgg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ttctccgacccagtctttccacttcagaatgatggagtgtctccttctaagggactttgg 220

                              
Query: 601 cctctcacagggaggaaga 619
           |||||||||||||||||||
Sbjct: 219 cctctcacagggaggaaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no291_l17.g1 MSMg01no291_l17.g1 CHROMAT_FILE:
MSMg01no291_l17.g1 PHD_FILE: MSMg01no291_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:36 2005
         (236 letters)



>mm_chr5_53589706_53590341
          Length = 636

 Score =  441 bits (228), Expect = e-128
 Identities = 234/236 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtcctatccacagtcccaccccctagaccagagattgaaattttggggtgcatcagagt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 agtcctatccacagtcccaccccctagaccagagattgaaattttggggtgcatcagaat 260

                                                                       
Query: 61  ccatgtcagatgctgagcccactccatctccagtcctaggtagctgaggaacattgtgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatgtcagatgctgagcccactccatctccagtcctaggtagctgaggaacattgtgtt 320

                                                                       
Query: 121 gatagcacaaacactagatactgcggttgcaagtgctcatgggtggaaatcatactagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatagcacaaacactagatactgcggttgcaagtgctcatgggtggaaatcatactagac 380

                                                                   
Query: 181 ctgggtggggtctggtgacagaccctgctcactccccatgccaagtgaagagaact 236
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgggtggggtctggggacagaccctgctcactccccatgccaagtgaagagaact 436


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space:   142329
Effective search space used:   142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)