Query= MSMg01no293_a05.b1 MSMg01no293_a05.b1 CHROMAT_FILE:
MSMg01no293_a05.b1 PHD_FILE: MSMg01no293_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:15 2005
(326 letters)
>mm_chr5_145482228_145482953
Length = 726
Score = 563 bits (291), Expect = e-165
Identities = 312/319 (97%)
Strand = Plus / Minus
Query: 5 gaattcttccaatgaaggaaccagatactcattttaaaatgtgattctaatgaatgaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gaattcttccaatgaaggaaccagatactcattttaaaatgtgattctaatgaatgaaat 653
Query: 65 gaagccaggggtggctcccgcatgactccaatcctagcactacggaggcacaggctagcc 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 652 gaagccaggggtggctggcgcatgactccaatcctagcactacggaggcacaggctagtc 593
Query: 125 agggcaacatagtgagactgttgttttaaacgttaaaacaggaggaggagggggaggagg 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 592 agggcaacatagtgagactgttgttttaaacattaaaacaggaggaggagggggaggagg 533
Query: 185 gggaggagactaggatcacaccatactttgcaggttgcagtggagagaaaagacagggaa 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gggaggaggctaggatcacaccatactttgcaggttgcagtggagagaaaagacagggaa 473
Query: 245 gtactaaaatctgcccatctcatggtccagtgttctcaaaccttaaatgagtggcaaggt 304
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtactaagatctgcccatctcatggtccagtgttctcaaaccttaaatgagtggcaaggt 413
Query: 305 gttaagggaggcatttttg 323
|||| ||||||||||||||
Sbjct: 412 gttaggggaggcatttttg 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_a05.g1 MSMg01no293_a05.g1 CHROMAT_FILE:
MSMg01no293_a05.g1 PHD_FILE: MSMg01no293_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:16 2005
(290 letters)
>mm_chr5_145300428_145301116
Length = 689
Score = 545 bits (282), Expect = e-160
Identities = 288/290 (99%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 ttgagatggccaatgtacaattagttaattagatcctggggcctcataaagcatccatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ttgagatggccaatgtacaattagttaattagatcctggggcctcataaag-atccatct 259
Query: 61 cagtaagggcaattaaaagcacaaacttgtaaacgtagagagtctagggagagtattgag 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagtaaggacaattaaaagcacaaacttgtaaacgtagagagtctagggagagtattgag 319
Query: 121 agctgtggaccactcaactgtggacatgagcattgtggtggtttgaataaaaatggcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agctgtggaccactcaactgtggacatgagcattgtggtggtttgaataaaaatggcccc 379
Query: 181 cataggcccatagggagtgtcactgttaggaggtgtggctgtcttggagtaagtgtggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cataggcccatagggagtgtcactgttaggaggtgtggctgtcttggagtaagtgtggcc 439
Query: 241 ttgttggaggaagtgtgtcactggagaatgggcttggaggtctgagaagc 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgttggaggaagtgtgtcactggagaatgggcttggaggtctgagaagc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
