TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCACATCTATGACTGGCAGGTACTGATGTGGTTGGGATGTAAATAAG
CTCAGGAATGTCAAATACTAGGACGGAGGTTCCAGAAAAGCTAAAAATAA
CACTAACTTCCTGCAATATTAATCATGGGCATATACTCAGAGTGATCAAA
GTAAAAGTCGGAATACAAAAAGGAAGCTAAATATTCAGGTGACTATAGCA
GTATTCACAATAGCCAAGTTAGGAACTTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGAGTGTATNATATNCTCCCNNCCCCN
CCCCCCTCCCTTTTTTTTTTCTCCCCCCCCCCCCCCCCCCNNNNCNCNNN
NNNNNNCNTNCNNTCCNTCCCCCCCCCCAAAAAAAAAAAAAAAACCCCCT
TTTTTCTCTTCTTCCTCTTACACTTTTTCTAAATCTTTCATCTCTATACA
TCCTATACTCTTTTTCCACTCCTCCCCTTTCCCCCTTTCTCCATTTCCTT
TACCCTTTACCTTTTCACTTTATCCCACCTCCCTCCTACCCCTCCCCCCC
CCTTTTCTTTTCCTTTATCCTTATTTATATTTTACAATTTCTCCCCTCCA
TACAAATTAAATATATTCCTCCCTCCCTCCTTTCTTTTTATCTTTTATTT
CTATTTTTCTTCCTCTCCCTCTTATACCCCTTCCTTTCTTTTCTTATTTT
TTT

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTTCATCAGTGTGGGCCATTATACA
TGTGCTATTAAGGTAGGTGAGGCTTGTAGCTATCTTGTTGGACTGGGCAG
ATGCATTAATAGTTTCATATTTGCAGAGAATCTTATTAGGTAACAGTTGT
TAGCTATCATGGAGCCTGAAAACAGTAACCAGTTTCCTCCACAGTCAAGT
TCAAGCTACCTGACCTGGAGAGCAGGCTCCTTTCTGCCTTCTTCCCATAT
CTGTGAAGGAGATGCTGTCCAGCATCTTTACTACTTAGACAACTGAACAT
AGTCTTGGGGAGGATGAATCTCTTGCTAATAACTGCTCTGATGTCCCTTT
GGCATCCAGCCTTTCAGGATAAACAAGAAAATCACACAGCCCATATTCTC
TCTGCTTGCTCCTACACCCACTTAAATCAATGGAGCTTTATCTCAAAATG
TTTCTTGTTTGACTTCTAATAGTGAAGGTTATCTAATTTGCCTTTTGCCT
TCATATGTTCATATTCATATTTTTCCTTTTTAGTATCTAATTTGATATAG
GGGAGGTAGTGTCAAAATTTTCTCCCAAAGCTAAGGTCATAATGTCCTCA
GGAAATAAGCATTGCCAACTTTTAGCAAGCCCACCTGGTGCCATGACACA
GGTAGCTTTCCTATGCTCTCT

Query= MSMg01no294_a01.g1 MSMg01no294_a01.g1 CHROMAT_FILE:
MSMg01no294_a01.g1 PHD_FILE: MSMg01no294_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:34 2005
         (647 letters)



>mm_chr5_51139026_51140072
          Length = 1047

 Score = 1197 bits (619), Expect = 0.0
 Identities = 640/647 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttcatcagtgtgggccattatacatgtgctattaaggtaggtgaggcttgtagctatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttcatcagtgtgggccattatacatgtgctattaaggtaggtgaggcttgtagctatc 260

                                                                       
Query: 61  ttgttggactgggcagatgcattaatagtttcatatttgcagagaatcttattaggtaac 120
           ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 261 ttgttggactgggtagatgcattaacagtttcatatttgcagagaatcttattgggtaac 320

                                                                       
Query: 121 agttgttagctatcatggagcctgaaaacagtaaccagtttcctccacagtcaagttcaa 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 agttgttagctatcatggagcctgaaaacagtcaccagtttcctccacagtcaagttcaa 380

                                                                       
Query: 181 gctacctgacctggagagcaggctcctttctgccttcttcccatatctgtgaaggagatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctacctgacctggagagcaggctcctttctgccttcttcccatatctgtgaaggagatg 440

                                                                       
Query: 241 ctgtccagcatctttactacttagacaactgaacatagtcttggggaggatgaatctctt 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtacagcatctttactacttagacaactgaacatagtcttggggaggatgaatctctt 500

                                                                       
Query: 301 gctaataactgctctgatgtccctttggcatccagcctttcaggataaacaagaaaatca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctaataactgctctgatgtccctttggcatccagcctttcaggataaacaagaaaatca 560

                                                                       
Query: 361 cacagcccatattctctctgcttgctcctacacccacttaaatcaatggagctttatctc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagcccatattctctctgcttgctcctacacccacttaaatcaatggagctttatctc 620

                                                                       
Query: 421 aaaatgtttcttgtttgacttctaatagtgaaggttatctaatttgccttttgccttcat 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaatttttcttgtttgacttctaatagtgaaggttatctaatttgccttttgccttcat 680

                                                                       
Query: 481 atgttcatattcatatttttcctttttagtatctaatttgatataggggaggtagtgtca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgttcatattcatatttttcctttttagtatctaatttgatataggggaggtagtgtca 740

                                                                       
Query: 541 aaattttctcccaaagctaaggtcataatgtcctcaggaaataagcattgccaactttta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaattttctcccaaagctaaggtcataatgtcctcaggaaataagcattgccaactttta 800

                                                          
Query: 601 gcaagcccacctggtgccatgacacaggtagctttcctatgctctct 647
           |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 801 gcaagcccacctggtgccatgacacaggtagctttcctgtgctctct 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)