Query= MSMg01no296_g14.b1 MSMg01no296_g14.b1 CHROMAT_FILE:
MSMg01no296_g14.b1 PHD_FILE: MSMg01no296_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:35 2005
(341 letters)
>mm_chr5_102939987_102940727
Length = 741
Score = 530 bits (274), Expect = e-155
Identities = 320/342 (93%), Gaps = 13/342 (3%)
Strand = Plus / Minus
Query: 1 gggatgtgactcccatgaccacatctgtca-aatggacctacacacttcagctgagcaac 59
||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 657 gggatgtgactcctatgaccacatctgtcagaa-ggacctacacacttcagctgagcaac 599
Query: 60 atgttccaatccttcctggtgtttccccctccagtgggaagaactgttcggggtactaac 119
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 598 atgttccaatccttcctggtgtttccccctccagtgggaagaactgttcagggtact--- 542
Query: 120 ttcctttgaacttccctgtgacaacagaaggaaatttaagccccctgtttctataattta 179
||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 541 --------aacttccctgtgacaacagaaggaaatttaagctccctgtttctataactta 490
Query: 180 tacaccagagaatggctccctataattgtagggtatctaaatgctcccaggtttgtattt 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tacaccagagaattgctccctataattgtagggtatctaaatgctcccaggtttgtattt 430
Query: 240 ttgcatgaaaacaaaatgaggtttaagaaaatatttcgtgataacttggagagaactttg 299
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 429 ttgcatgaaaacaaaatgagatttaagaaaatatttcgtgatgacttggagagaactttg 370
Query: 300 agcagaaatcactgtcttcaaacattaattcaatctcttagc 341
||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 369 agcagaaatcactgtcttcaaacgttaattcaatttcttagc 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_g14.g1 MSMg01no296_g14.g1 CHROMAT_FILE:
MSMg01no296_g14.g1 PHD_FILE: MSMg01no296_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:36 2005
(289 letters)
>mm_chr5_102767061_102767749
Length = 689
Score = 489 bits (253), Expect = e-143
Identities = 280/289 (96%)
Strand = Plus / Plus
Query: 1 ttttgctgccttctctctctaagccaccatgagggactgtaactgagcctgcgttctttt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 201 ttttgctgccttctctctctaagccaccatgagggactgtaactgagtatgctttctttt 260
Query: 61 gaatattaatccattgtatgggtggagggcagttgctttttcatgggcttgctgagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatattaatccattgtatgggtggagggcagttgctttttcatgggcttgctgagagaa 320
Query: 121 acgtgttagctccagtttggagatccgaacacagagtgaggaggagctcgcatgtttatc 180
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 321 acgtgttagctccagtttggagatccaaacacagagtgaggaggagctcacatgtttatc 380
Query: 181 cttggatgtatgcttttcttttttctgggttcaaaaccatggataaggagagggactcac 240
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 381 cttggatgtatgcttttctttttgctgggttaaaaaccatggataaggagagggactcac 440
Query: 241 atggtaagtgcgtatttagtttattaaaacatcaccaaatctcttttga 289
|||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 441 atggtaagtgcggatttagtttattaagacatcaccaaatctcttttga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
