Query= MSMg01no297_p24.b1 MSMg01no297_p24.b1 CHROMAT_FILE:
MSMg01no297_p24.b1 PHD_FILE: MSMg01no297_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:35 2005
(700 letters)
>mm_chr5_134206970_134208069
Length = 1100
Score = 1201 bits (621), Expect = 0.0
Identities = 648/657 (98%)
Strand = Plus / Minus
Query: 44 aaaattaagaattaacttttatcaaagcgatgcatggaactagtttttcaaaatcaaaca 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 aaaattaagaattaacttttatcaaagcgatgcatggaactagtttttcaaaatcaaaca 1041
Query: 104 gcactaatggacttgaaatgaggagctgtagtctgcctctggcttcacgccccaccccta 163
||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||
Sbjct: 1040 gcactaatggacttgaaatgaggagctgtagtctgccgctggctgcatgccccaccccta 981
Query: 164 gcgtgctctctaggggaaatcaccacattccatttcagctatttcttccagtgtttatct 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 gcgtgctctctaggggaaatcaccacattccatttcagctatttcttccagtgtttatct 921
Query: 224 ccctgtttcccaataatatgtgtcataagacattaaatggatttttactttggtctctga 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ccctgtttcccaataatatgtgtcataagacattaaatggatttttactttggtctctga 861
Query: 284 attgttgctatagcctcaaagctgaaaataataggtgccaagaactcccatagcccgaag 343
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 860 attgttgctatagcctcaaatttgaaaataataggtgccaagaactcccatagcccgaag 801
Query: 344 agaattgacaagataatgagactcatctcccaagactttataaacatccggcaagaatag 403
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 800 agaattgacaagataatgagactcatctcccaagactttacaaacatccggcaagaatag 741
Query: 404 caagaataagataatgttcacatggtatctaccatgttacaggttctagtctaaaggtca 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caagaataagataatgttcacatggtatctaccatgttacaggttctagtctaaaggtca 681
Query: 464 caagtttattatcatttaactgctgcagtggcccagtgaggtgaatgttgaatcacacca 523
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 caagttcattatcatttaactgctgcagtggcccagtgaggtgaatgttgaatcacacca 621
Query: 524 tcaaccatttaaagccagccaatagcataacgatagttatctctgggactgaggcaaaca 583
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 620 tcaaccatttaaagccagccaatagcaaaacgatagttatctctgggactgaggcaaaca 561
Query: 584 tgaattagcaccattcttgcctggagtgctcaaagtaccaggctctatctcagaatcata 643
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 tgaattagcaccattcttgcctggagtgctcaaagtaccgggctctatctcagaatcata 501
Query: 644 tacatctggtatggtggtgtatgtttgtaatctcagcacttcagagagaaaagaaag 700
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tacatctggtatggtggtgtatgtttgtaatctcagcacttcagagagaaaagaaag 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space: 752100
Effective search space used: 752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_p24.g1 MSMg01no297_p24.g1 CHROMAT_FILE:
MSMg01no297_p24.g1 PHD_FILE: MSMg01no297_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:35 2005
(665 letters)
>mm_chr5_134179558_134180617
Length = 1060
Score = 1174 bits (607), Expect = 0.0
Identities = 645/661 (97%), Gaps = 7/661 (1%)
Strand = Plus / Plus
Query: 6 ccagatgtctgtatttcaaagcaggaaatctaaacataataagcctctttaagttgcatg 65
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ccagatatctgtatttcaaagcaggaaatctaaacataataagcctctttaagttgcata 265
Query: 66 tagtgtgacctgggcctgtagttccatacatttggacagaagggattgatatcagaagtt 125
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 266 tagtgtgacccgggcctgtagttccatacatttggacagaagggatggatatcagaagtt 325
Query: 126 caaggactccattgggtgaattaagtaaggacagcttgaccaactagtaagaccttatct 185
||||||||| |||||||||| ||||||| |||| ||||| |||||||||||||||
Sbjct: 326 caaggactctattgggtgaactaagtaaagacaccttga------agtaagaccttatct 379
Query: 186 caaagtaaagaatgaaaaa-gggttacaactatgaatcagtggtagagtgcttgtctgaa 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaagtaaagaatgaaaaaagggttacaactatgaatcagtggtagagtgcttgtctgaa 439
Query: 245 atctgtcagtgaagggctaagggtgtggcacagtggtgaagaatttactagaatccccga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atctgtcagtgaagggctaagggtgtggcacagtggtgaagaatttactagaatccccga 499
Query: 305 gtaagggggattggctgaagctaaatggtggagccctagcctagcatgcgtgaggccctg 364
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 500 gtaagggggattggctgaagctaaatggtggaggcctagcctagcatgcgtgaggccctg 559
Query: 365 ggttcaatccccagtgcaacacaaccatagtaatcaaaacaagcccctttaaactagtgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggttcaatccccagtgcaacacaaccatagtaatcaaaacaagcccctttaaactagtgt 619
Query: 425 tgaagtctagtttatttctccctttatatggaacacagcatctgtttaatgaacacccag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgaagtctagtttatttctccctttatatggaacacagcatctgtttaatgaacacccag 679
Query: 485 catacgggaagaaatatggtatacacgatgaaaaaggaagtttgcccataaatcatgtga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 catacgggaagaaatatggtatacacgatgaaaaaggaagtttgcccataaatcatgtga 739
Query: 545 gtggaaccagtgttttaaacaatgcctaaggggcaaataattttttatagtcattctgga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtggaaccagtgttttaaacaatgcctaaggggcaaataattttttatagtcattctgga 799
Query: 605 aacacagatctggtgaaattacctagtaaaagccttgcaaatttccattcctttatcaga 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aacacagatctggtgaaattacctagtaaaagccttgcaaatttccattcctttatcaga 859
Query: 665 a 665
|
Sbjct: 860 a 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1060
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1050
Effective search space: 687750
Effective search space used: 687750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
