TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGAATCCGCGG
AATTCTGGTCACTCTCCTACAATATATATAAATATTATAGATATTATACA
TCTCTCATATATAATAGATATGATTTTATGTTACATATAATATAGTATAG
ATTATACATGGTATATAAATATATATAATATATATTCATATATGTGTGAA
TATATACATGTATGTATATATATGTATATATTCTGTATTCAATTTTACCA
ATTCTTTTCTCTCCCTGTACATTCAACTGTTTATCCTACAATAATATATG
TTAACAAGTATATATATTTGCATTGGGCATTGTACTTTTTTTCTTCTTAA
AATTTCTAGTAGTTCTGCTATTTCATCGTTCTTTGTTGGGATCAGATTTT
TTTTTATCTGTTGAGGAATGTTCATGGGACTCTTAAAGCATTTGTTCATG
GCTCTTGTAAAATATTTATCATATAAGTATATCATCTTTCTTGTAAAATA
TTTATCATATAAGTATATCATCTTTTTGTCACTTATGATTTCTTGTCATT
TTCTTTTCTTAGAGGATTTCTTGGGATGATTCATGCTTTTAAATTGAAAC
CTGGAAAGTTTGGATATTCTTAGGTCTTTGTGTCTTATTTAAGTGTCTGC
TCTAGCTGGCTTTGTTAAACATTGACTTGGTAGAGAAAGGAGTATCACTT
CATTACTCCTGGGTGAGATCAAAATTTTTGTCTTGTGTTTCTGTTGACAT
ACT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTAAAAGTGTTTGTATATATTCTCA
CATATGTGTACTTATGGGCACATATGTGTACTTAGGCATTGGAAAACAAA
AACTATGTTTTAATTCAGAATTACAGAATCAGTTTGGATGCAAAATATAA
ATTGGGTTAGAAGAGTTAAGAACAGATGGAGATTTGCTATTTTAGGTTAA
GTAAGACATGAAACTACCTTGGATAGGAAAGTAATGATGGAAATTTAGAG
AAGTTGCTGAATTAAAGTTGGGGTAAAAGTCTGCAAGGGTGGTATCCAAT
ATGTTGCTTAAATAATCAATGGGAAGGGGATTCTTGACTGAGCTGAAGTA
CCTGGCCACTTTCCAGCTTTGCAGATACCAACCTGGCTTTTGCATTGGAC
ATTTTGAAGTTGAGAGGCCTTGAAATGATGTCCATGTGGAGATACGAAAG
AGACAATTAGTTAAATGATCTGAAACCGTTGGGAGAGGTCAGGATTCCAG
GACATCGATTTGATGGTTTTGAGGCATATGGTAACGATCAGTCCTCCTTC
TTGTGTGAGGTTTCCTATAGGGTGAGAACGTGGCCCACACCCAATCCTGA
AGAGCTCTAACACACTGGCCAGTTCAAGGAAAATAAACCAGAGAATAAGG
CAAAAAGGAAACAGAGGCTTCGAGGGAGAACATATGTGATAGCAAGAATG
TGGTG

Query= MSMg01no298_g17.g1 MSMg01no298_g17.g1 CHROMAT_FILE:
MSMg01no298_g17.g1 PHD_FILE: MSMg01no298_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:06 2005
         (678 letters)



>mm_chr5_46782078_46783155
          Length = 1078

 Score = 1077 bits (557), Expect = 0.0
 Identities = 566/569 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaaaagtgtttgtatatattctcacatatgtgtacttatgggcacatatgtgtacttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttaaaagtgtttgtatatattctcacatatgtgtacttatgggcacatatgtgtacttag 510

                                                                       
Query: 61  gcattggaaaacaaaaactatgttttaattcagaattacagaatcagtttggatgcaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gcattggaaaacaaaaactatgttttaattcagaattacagaatcagtttggatgcaaaa 450

                                                                       
Query: 121 tataaattgggttagaagagttaagaacagatggagatttgctattttaggttaagtaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tataaattgggttagaagagttaagaacagatggagatttgctattttaggttaagtaag 390

                                                                       
Query: 181 acatgaaactaccttggataggaaagtaatgatggaaatttagagaagttgctgaattaa 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 389 acatgaaactaccttggataggaaagtaatgatggaaatttagagaagttgctgaattga 330

                                                                       
Query: 241 agttggggtaaaagtctgcaagggtggtatccaatatgttgcttaaataatcaatgggaa 300
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 329 agttggggtaaaagtctgcaagggtggtatccaatacgttgcttaaataatcaatgggaa 270

                                                                       
Query: 301 ggggattcttgactgagctgaagtacctggccactttccagctttgcagataccaacctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggggattcttgactgagctgaagtacctggccactttccagctttgcagataccaacctg 210

                                                                       
Query: 361 gcttttgcattggacattttgaagttgagaggccttgaaatgatgtccatgtggagatac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gcttttgcattggacattttgaagttgagaggccttgaaatgatgtccatgtggagatac 150

                                                                       
Query: 421 gaaagagacaattagttaaatgatctgaaaccgttgggagaggtcaggattccaggacat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gaaagagacaattagttaaatgatctgaaaccgttgggagaggtcaggattccaggacat 90

                                                                       
Query: 481 cgatttgatggttttgaggcatatggtaacgatcagtcctccttcttgtgtgaggtttcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  cgatttgatggttttgaggcatatggtaacgatcagtcctccttcttgtgtgaggtttcc 30

                                        
Query: 541 tatagggtgagaacgtggcccacacccaa 569
           |||||||||||||| ||||||||||||||
Sbjct: 29  tatagggtgagaacatggcccacacccaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space:   713424
Effective search space used:   713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)