CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAACTTTGTACCATCGAATGGCTGAGAAGCACCTGAAAAAATGTT
CAACAGCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATCCAAGTAACAGCAG
ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCTTTGCTGGTGGG
ATTGCAGGCTTGTAAAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGA
AATTTGGACATTGTACTACTGGAGGATCCAGCAATACCTCTCCTGGGCAT
ATATCTGAAAGATGTTCCAACTGGTAATAAGAACACATGCTCCACTATGT
TCATAGCAGCTTTATTTATAACACCCAGAAGCTGGAAAGAACCCAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGA
GTACTAATCAGCTATTAAAAACAATGAATTTATAAAATTCCTAGGCAAAT
GGATGGATCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAG
AACTCACATGATATGCAGTCACTGATAAGTGGATATTAGCCCAGAAATTT
AGAATACCCAAGATACAGCTTGCAAAACACATGAAACTCAAGAAGAAGGA
AGAGCANAATGTGGACAATTTGCCCCTTCTTAGAATTGGGAACAAAACAC
CCATGG

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCTCAGTTACTTCAAAGACAAACAG
CAGCACTGGCCTGGAAGACAGAGGTGAGGGAAAGCCCTCTGTGGGATGCC
AGGACCCTGGCCACACAGCGCCACACCTTGCACCAAGTTTCACCTGCTGG
AGCATCCTCCTGCCCATTTGTTCCCTCCATAGAGCACAGAGCCTTACACA
TACATTTGTAAAGTTGGCCATTATTTTTAAGTTTCATCCTCTTCTCAAAG
TATATTCTTAGTTGGGTGTATTGGTTTAATTATGGTAATTAAATGAAGTA
TGCATGTGTGTATGTGTGTCTGGAATTGAGCTGGTCATCTGAAGCATGAT
GAATGTTTACCTGGTCACCACCACAGCACTGAGCTCTGCCTTTTCCTCAG
ATGAATTTAGCAGCAGTGAGGGTACAGGAGAAAAGACTGAGCCAAATGAA
GATGATGGCAGCATCAAGTCACAGGAGGTGAGAACTGCTTTTCATATTTA
TTCTCTCAAAATAACTTCCAGTGTGTCATGTGCCTCTTTGTGAGTTTTTC
ATAAGTACTTTTTTGGCTGTTTTTAATGCAGCAGGACACTTTTAAACAGT
ATGCTTTATTAATGTCACTCTGACTAATTTCGTTTGCTCGGTAAATCCTA
TTCTATGCCCTCATTAGATAGGATCAGCTCAACATTTTGCCCATGGGTAT
TGCN

Query= MSMg01no299_c23.g1 MSMg01no299_c23.g1 CHROMAT_FILE:
MSMg01no299_c23.g1 PHD_FILE: MSMg01no299_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:02 2005
         (544 letters)



>mm_chr5_42191708_42192649
          Length = 942

 Score =  948 bits (490), Expect = 0.0
 Identities = 530/544 (97%), Gaps = 2/544 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcctcagttacttcaaagacaaacagcagcactggcctggaagacagaggtgagggaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 742 tcctcagttacttcaaagacaaacagcagcactggcctggaagacagaggtgagggagag 683

                                                                       
Query: 61  ccctctgtgggatgccaggaccctggccacacagcgccacaccttgcaccaagtttcacc 120
           |||||  |||||||||||| ||| |||||||||| |||||||||||||||||||||||||
Sbjct: 682 ccctc--tgggatgccagggcccaggccacacagtgccacaccttgcaccaagtttcacc 625

                                                                       
Query: 121 tgctggagcatcctcctgcccatttgttccctccatagagcacagagccttacacataca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 624 tgctggagcatcctcctgcccatttgttccctccatagagcacagagccttacgcttaca 565

                                                                       
Query: 181 tttgtaaagttggccattatttttaagtttcatcctcttctcaaagtatattcttagttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 564 tttgtaaagttggccattatttttaagtttcatcctcttctcaaagtatatccttagttg 505

                                                                       
Query: 241 ggtgtattggtttaattatggtaattaaatgaagtatgcatgtgtgtatgtgtgtctgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggtgtattggtttaattatggtaattaaatgaagtatgcatgtgtgtatgtgtgtctgga 445

                                                                       
Query: 301 attgagctggtcatctgaagcatgatgaatgtttacctggtcaccaccacagcactgagc 360
           |||||||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||
Sbjct: 444 attgagctggtcctctgaagtatgatgaatgcttacctggtcaccagcacagcactgagc 385

                                                                       
Query: 361 tctgccttttcctcagatgaatttagcagcagtgagggtacaggagaaaagactgagcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctgccttttcctcagatgaatttagcagcagtgagggtacaggagaaaagactgagcca 325

                                                                       
Query: 421 aatgaagatgatggcagcatcaagtcacaggaggtgagaactgcttttcatatttattct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 324 aatgaagatgatggcagcatcaagtcacaggaggtgagaactgcttttcatatttattcg 265

                                                                       
Query: 481 ctcaaaataacttccagtgtgtcatgtgcctctttgtgagtttttcataagtactttttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcaaaataacttccagtgtgtcatgtgcctctttgtgagtttttcataagtactttttt 205

               
Query: 541 ggct 544
           ||||
Sbjct: 204 ggct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 942
Length adjustment: 10
Effective length of query: 534
Effective length of database: 932
Effective search space:   497688
Effective search space used:   497688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)