TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATCCTCCTGTGTAAGGCATGTCTGTCAGTATAGTCTTTGTTCAT
GTGTGATTTCTGATTATAATTATCTATTTCACTCCTAAGAGTGCATTTTG
AGAATTTTTTTTTTATTTTGAACACAGTGATGGTTAATTTTTGTTGTCAA
CTTTATGCAGTTAAAACATCACTATGTGAACAAATGTCTGGGCGTGTAAT
TGAAGAAGGTTTAAGATTTGGTTATTTGATATGTGAAGACATACCTAATT
GTGAGTGACATCTTTTCATGGGCTCTCACCATTTTCTGCCTCTGTGGTGT
GACCAGAGACTTCATGTCACTGTGACACAGAACACTCTCAAACTATATGA
GTGATCTTTTCTTCTTTCCTGAAGTAATACAGTTTTAGCCCTGTAATTTT
CTTTGGAGTATTTTTAAGGGCCTTAAATATTTTAATTCATGTATTCTGAT
TTCTTCTTATGACATTTTATTTTATTTTTTATTAGATTTCTTCATTTACA
TTTCTAATTTTATTTGAGCCACACCATCATTCTCTGCAGTTAGTCATTTT
AACATTTCTTACCTTTATATACAGTAATAATAGTCATTGTATAATTTTAT
TTGAAATGTTTTCATAGTTAATGAATTAACTGATGTCGTGAGTTCCCTAC
TGTAGGAGACAGGATAGACTATTGCAGAT

GATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGGGCCAAAAGGTGGGAGTGGGTGGG
TGGGGGAGTGNNTTTTTCCCCCCCTTTGGGGGGGGTTTCTTTTTTTCTTT
TTTTTTTTTTTTTTTCTTGTTTGTGGAATTCGTTTTCTTTCTTTTATATC
TTCTGTTGTGTGTTATTATAATTGTTTATTTTTCTTATTATTTAATTACT
TTTTTACAAAATATTAATCCACATCATCTATATTATTAAAACAGCGCTAG
AACTTTACCACAAAGAGTAATTTTTTTTTTTTTAGAATAAGTGTAAAAGA
AAAAAAAAAAAATTTTTAAGTGAATTTCAAANAACCAAAAACCCATAATG
TATTTTTAAGTGTTTGTTGTTGTGTCTCCCCCCCAAAAAAAAAAAAAAAA
AACAATGGGGGGGGGGGGGGTGCTTTTTTTTCACTCCTTATCCTTCGTTT
TTTTCTACCTATTACCACAATACTTTATCTCACACCATTTTCAATCACTC
CTGTTGACCCTTTTTCCTCTCCTCTTATCTTTTATATTGCACTATATACA
CGAGTTGCACTGCCCCATTATTCCATTTTCTCTATCCTTGACCTTTTTTT
TCGCTCGGCGTATGTTTTATTCTATCTATACGTCATTTTACACCCGCCCT
TCTCTATAACTCCTTCTTTTTCATCTTCTCCTCTCTTTTATCCTCCTATT
ATCTAATTTCTATTATTTATTTAATAACAATAATCTATTATTTTACTCTA
CCTTATTAGCAATTTAAATTTACATTTCTT

Query= MSMg01no302_g12.b1 MSMg01no302_g12.b1 CHROMAT_FILE:
MSMg01no302_g12.b1 PHD_FILE: MSMg01no302_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:02 2005
         (610 letters)



>mm_chr5_62680889_62681898
          Length = 1010

 Score = 1102 bits (570), Expect = 0.0
 Identities = 597/606 (98%), Gaps = 2/606 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatcctcctgtgtaaggcatgtctgtcagtatagtctttgttcatgtgtgatttc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 gaattcatcctcctgtgtaaggcatgtctgtcagtatagtctttgttcatgtgtgatttc 844

                                                                       
Query: 65  tgattataattatctatttcactcctaagagtgcattttgagaattttttttttattttg 124
           ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 843 tgattataattat-tatttcactcctaagagtgcattttgagaa-tttttttttattttg 786

                                                                       
Query: 125 aacacagtgatggttaatttttgttgtcaactttatgcagttaaaacatcactatgtgaa 184
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 785 aacacagtgatggttaatttttgttgtcaactttatgcagttaaagcatcactatgtgaa 726

                                                                       
Query: 185 caaatgtctgggcgtgtaattgaagaaggtttaagatttggttatttgatatgtgaagac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 caaatgtctgggcgtgtaattgaagaaggtttaagatttggttatttgatatgtgaagac 666

                                                                       
Query: 245 atacctaattgtgagtgacatcttttcatgggctctcaccattttctgcctctgtggtgt 304
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 665 atacctaattgtgagtgacatcttttcatgggctctcacctttttctgcctctgtggtgt 606

                                                                       
Query: 305 gaccagagacttcatgtcactgtgacacagaacactctcaaactatatgagtgatctttt 364
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gaccagagacttcatgccactgtgacacagaacactctcaaactatatgagtgatctttt 546

                                                                       
Query: 365 cttctttcctgaagtaatacagttttagccctgtaattttctttggagtatttttaaggg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cttctttcctgaagtaatacagttttagccctgtaattttctttggagtatttttaaggg 486

                                                                       
Query: 425 ccttaaatattttaattcatgtattctgatttcttcttatgacattttattttatttttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccttaaatattttaattcatgtattctgatttcttcttatgacattttattttatttttt 426

                                                                       
Query: 485 attagatttcttcatttacatttctaattttatttgagccacaccatcattctctgcagt 544
           |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||
Sbjct: 425 attagatttcttcatttacatttcaaattttatttgaaccacaccatcattctctgtggt 366

                                                                       
Query: 545 tagtcattttaacatttcttacctttatatacagtaataatagtcattgtataattttat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tagtcattttaacatttcttacctttatatacagtaataatagtcattgtataattttat 306

                 
Query: 605 ttgaaa 610
           ||||||
Sbjct: 305 ttgaaa 300


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space:   600000
Effective search space used:   600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)