CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAACATTGCCAATCTGAGTGGCCCAGAACAACTCGAAGAAATATT
TAAAGGCCTTAGTCATCAGAGAAATGCAAAGCAAAACAACTTTGAGGCTC
CAACTTACACCCATCAGAATGGCTAAGATCAAAACCTCAATGGATAAAAC
ATGCTTGCAAGGATGTGGAGCAAGTTGAACACTTCCTTGTGAGAACAAAC
TTGGACAGCAACTTTGGCTTTTTTTTTTTAAACTGGGAATAGTTCTACCT
AAAGACCCAGCTATACCACTCCAGGACATATGCCCAAAAGGTACTACAAC
ATCACACAAAGATATTTGTTCAAATATGTCCATACCAATTTTATTCATAA
TAGCCAGAAACTGGACAATTTTGCTTGTATAGCCAAATAATACCAAGGAA
GGCAAGATTCATATCTGAACAGCTATTATGATGAAAATAATGGAGAACAG
AAGGTGAGAAATTAATGCTGGTAACCTGGGATGGAGGAAGCCATGTGGTG
GATAAGCCCAGCTCTTTTGTAGTTGTGGAGTTGTGGAATATTAAGGAAGT
TCAAATTATCAGTAAAAGCATATGTAGGCACTGAACAAAGGGAACAGAAA
AGAAGAAAGGAGGAAATTATGCCTTTCTGAATTAGCACTCAGAAAATTAG
GGGAGACAAAACACAACCCCCTTATTTCTTTTG

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACGCAGTTGAATCCTTCTCAACAGTCT
GTGTTGTGGGAACACTTCATTACCACCGTTCCCCAGCTGAAGAGTTCTGA
ATTCACGCAGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAACACTTCA
TTACCATGACCCTCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCC
GGTGATGGTAACTGTCCCAGGTTTTCTCGTCCCAGGTCTTCTCGTCCTGG
GTTTTCTCGTCCCATCCCGGTTTTCGGCACCAACTCTTACCCGCGTTCTC
ACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGCGGCAAAGCT
TTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGAGCAATAGTGCAAG
AGAGCAAGAGCAAGAAAGAGCAAGAAAGCAAGAACAAGAAAGCAAGAGAG
AGAAAAAGCAAGAACAAGAGAGAGAAAAAGCAAGAACAAGAGAGAGAAAA
AGAACAAGAACAAGAAAGCAAGAGAAAGAAAAAGAATGGCAAAACCCCGT
CCCTTTTAAGGAGAATTATCCTCCGCCTAGGACGTATTACTCCCTGATTG
GCTGCAGCCCATCCATCGGCCCAGTTGTCATCACGAGAAAGGCAGAACAC
ATGGCGGGAAAACTGCCCCTGCACGTGTGCAGAT

Query= MSMg01no307_j12.b1 MSMg01no307_j12.b1 CHROMAT_FILE:
MSMg01no307_j12.b1 PHD_FILE: MSMg01no307_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:41 2005
         (689 letters)



>mm_chr5_60959926_60961013
          Length = 1088

 Score = 1164 bits (602), Expect = 0.0
 Identities = 652/680 (95%), Gaps = 21/680 (3%)
 Strand = Plus / Minus

                                                                        
Query: 28   agtggcccagaacaactcgaagaaatatttaaaggccttagtcatcagagaaatgcaaag 87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 agtggcccagaacaactcgaagaaatatttaaaggccttagtcatcagagaaatgcaaag 1029

                                                                        
Query: 88   caaaacaactttgaggctccaacttacacccatcagaatggctaagatcaaaacctcaat 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 caaaacaactttgaggctccaacttacacccatcagaatggctaagatcaaaacctcaat 969

                                                                        
Query: 148  ggataaaacatgcttgcaaggatgtggagcaagttgaacacttccttgtgagaacaaact 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968  ggataaaacatgcttgcaaggatgtggagcaagttgaacacttccttgtgagaacaaact 909

                                                                        
Query: 208  tggacagcaactttggctttttttttttaaactgggaatagttctacctaaagaccc--- 264
            |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||   
Sbjct: 908  tggacagcaactttggc--tttttttttaaactgggaatagttctacctaaagacccagc 851

                                                                        
Query: 265  -agctataccactccaggacatatgcccaaaaggtactacaacatcacacaaagatattt 323
             ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 850  tagctataccactctaggacatatgcccaaaaggtactacaacatcacacaaagacattt 791

                                                                        
Query: 324  gttcaaatatgtccataccaattttattcataatagccagaaactggacaattttgcttg 383
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 790  gttcaaatatgtccataccaactttattcataatagccagaaactggacaattttgcttg 731

                                                                        
Query: 384  tatagccaaataataccaaggaaggcaagattcatatctgaacagctattatgatgaaaa 443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 730  tatagccaaataataccaaggaaggcaagattcatatctgaacagctattatgatgaaat 671

                                                                        
Query: 444  taatggagaacagaaggtgagaaattaatgctggtaacctgggatggaggaagccatgtg 503
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670  taatggagaacag-aggtgagaaattaatgctggtaacctgggatggaggaagccatgtg 612

                                                                        
Query: 504  gtggataagcccagctcttttgtagttgtggagttgt--------------ggaatatta 549
            |||||||||||||||||||||||| ||||||||||||              |||||||||
Sbjct: 611  gtggataagcccagctcttttgtaattgtggagttgtggatctaattttgaggaatatta 552

                                                                        
Query: 550  aggaagttcaaattatcagtaaaagcatatgtaggcactgaacaaagggaacagaaaaga 609
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 551  aggaagttcaaattatcagtaaaagcatatgtaggcactgaacaaaggaaacagaaaaga 492

                                                                        
Query: 610  agaaaggaggaaattatgcctttctgaattagcactcagaaaattaggggagacaaaaca 669
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491  ataaaggaggaaattatgcctttctgaattagcactcagaaaattaggggagacaaaaca 432

                                
Query: 670  caacccccttatttcttttg 689
            ||||||||||||||||||||
Sbjct: 431  caacccccttatttcttttg 412


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1088
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1078
Effective search space:   731962
Effective search space used:   731962
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)