NCTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTT
GATTTAGGATAGGTAAAGATCCTTTCTCAATCTATTGGTGGCCTTTTTGT
CCTATTGATAGTGTCTTTTCCCTTGCAGAAGCTTTGCAATTTTATGAGGT
CCCATTTGTTGATTCTATATCTTACAGCACAAACCATTGCTGTACTAGTC
TGCAATTTTTCCCCTGTACCCACATCTTTGAGGCTTTTCCCTCCTTTCTC
CTCTATAAGTTTCAGTGTCTCTGGTTTTATTTGGAGTTCCTTAATCCACT
TAGATTTGACCTTAGTTTTAGGTANTTCCCNGGACAAATCACATTCTTCT
ACATGATAATCGNCAGTTGTCCCCCCACCAAAAAGAAATAAAAATGGCGG
GGGGGGGGGGATGTTGTTTGCTCCCTTGTCAAGGATCAAGTGACCATAGG
TGTGTGGTTTCATTTCTGCCTCTTTCATTTCTATTCCATTGGTCTACTTG
TCCGACTGTTTTCAGTACCCTGCAGATTTTATCTCAATTGATCACGTAGA
ACACTTTCACTTCAATATTGTTGATTTATCCATAAGTTCCTTAACTTCAC
CCATCTCACTTTTATGTATTTCCTTTCACTCCATTTCCTATCCCTCGCTA
TTTTCCTTTTCTCCAATTTTACTTTATCCTAATTTTTATTTATTTCCTTC
CTATCTTTCTCTTTCATG

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAAAATACAATAAAATTGTGTTCCAAC
CGGTTGGCTTTATTAAGCAGTGCATTTGGAGGAATAAAAATCAATGTATG
ATTAAAATTAGCAGGCCTTGGGGATAGCATTTGAAATGTAAATGAAGAAA
ATATCTAATAAAAAATTAGGTGAGGCTGCAGGGTTTCGCTATGGAGCTTA
TAGAAGTGAGAAGCGCAGCTGTTTCGAGTTATCAAGTTCCTCTTACAGAC
AGAACATACGGTACGAGGTGTGTCCTAGTATGACCAGCCTGGTCTTCATT
GCTCTCAACCCTGAACCCACTTTCCAGTTCGGCAGAACAACACTGTGCTT
TCCTTTGTAGAGAAGAAATTCTAACCTTGAAAGAGTTAGAATTTATAGGG
TAAAGTGTTGAAAAGAGGGAGTTTTGGCAGCTACATCTTGGCATTAAGAA
TAGATTCATGATACTTGGTATTTTAGTGCTATCTAGTGTTAAGAAAATCT
GGCATTCCAAACTAACAAATTAGCCGTTGACTTCCATTTTCAAATGTGTG
ACTGAGCAATAGATTTGGATCTGTTATTTTAAGTTTAAAAACTTGTCAGA
TTTTTAAACAGTGTTAGAATATTTAGCGTTTATGTATTTATAAACAATCA
ATTATTATTCATCTCTCTGTCTCCCTATAATATTTGTT

Query= MSMg01no309_n20.g1 MSMg01no309_n20.g1 CHROMAT_FILE:
MSMg01no309_n20.g1 PHD_FILE: MSMg01no309_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:33 2005
         (553 letters)



>mm_chr5_7287589_7288539
          Length = 951

 Score = 1031 bits (533), Expect = 0.0
 Identities = 548/553 (99%), Gaps = 2/553 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaatacaataaaattgtgttccaaccggttggctttattaagcagtgcatttggaggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 aaaatacaataaaattgtgttccaaccggttggctttattaagcagtgcatttggaggaa 833

                                                                       
Query: 61  taaaaatcaatgtatgattaaaattagcaggccttggggatagcatttgaaatgtaaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 taaaaatcaatgtatgattaaaattagcaggccttggggatagcatttgaaatgtaaatg 773

                                                                       
Query: 121 aagaaaatatctaataaaaaattaggtgaggctgcagggtttcgctatggagcttataga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 772 aagaaaatatctaataaaaaattaggtgaggctgcagggtttcgctatggagcttatagg 713

                                                                       
Query: 181 agtgagaagcgcagctgtttcgagttatcaagttcctcttacagacagaacatacggtac 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 712 agtgagaagcgcagctgtttcgagttatcaagttcttcttacagacagaacatacggtac 653

                                                                       
Query: 241 gaggtgtgtcctagtatgaccagcctggtcttcattgctctcaaccctgaacccactttc 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gaggtgtgtcctag-atgaccagcctggtcttcattgctctcaaccctgaacccactttc 594

                                                                       
Query: 301 cagttcggcagaacaacactgtgctttcctttgtagagaagaaattctaaccttgaaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cagttcggcagaacaacactgtgctttcctttgtagagaagaaattctaaccttgaaaga 534

                                                                       
Query: 361 gttagaatttatagggtaaagtgttgaaaagagggagttttggcagctacatcttggcat 420
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 533 gttagaatttatagggtaaagtgttg-aaagagggagttttggcagctacatcttggcat 475

                                                                       
Query: 421 taagaatagattcatgatacttggtattttagtgctatctagtgttaagaaaatctggca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 taagaatagattcatgatacttggtattttagtgctatctagtgttaagaaaatctggca 415

                                                                       
Query: 481 ttccaaactaacaaattagccgttgacttccattttcaaatgtgtgactgagcaatagat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttccaaactaacaaattagccgttgacttccattttcaaatgtgtgactgagcaatagat 355

                        
Query: 541 ttggatctgttat 553
           || ||||||||||
Sbjct: 354 ttagatctgttat 342


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 951
Length adjustment: 10
Effective length of query: 543
Effective length of database: 941
Effective search space:   510963
Effective search space used:   510963
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)