Query= MSMg01no311_p07.b1 MSMg01no311_p07.b1 CHROMAT_FILE:
MSMg01no311_p07.b1 PHD_FILE: MSMg01no311_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:56 2005
(321 letters)
>mm_chr5_34656003_34656723
Length = 721
Score = 576 bits (298), Expect = e-169
Identities = 313/318 (98%)
Strand = Plus / Plus
Query: 4 ggaattccaaattttccagagtaattgaacacacagcctaatcctagtgtttatcacaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaaattttccagagtaattgaacacacagcctaatcctagtgtttatcacaca 263
Query: 64 gtttcactcaacaacatccatctccaaccagggtatacaatttctcttcaacagccacaa 123
|||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 264 gtttcactcaacaacacccatctccaaccaggatatacaatttctcttcaccagccacaa 323
Query: 124 ccatgctacttctaattcctttctgctgggtcaccttctacctagaggggatgttaaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccatgctacttctaattcctttctgctgggtcaccttctacctagaggggatgttaaata 383
Query: 184 tcttaggccaaggggcctgtcctccagtctgtccacctcaagatgtcaattgtaatcctc 243
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 tcttaggccaaggggtctgtcctccagtctgtccacctcaagatgccaattgtaatcctc 443
Query: 244 aaatagatttgctgttgttgttttattttgttcttgctccttggactccacccttgagta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaatagatttgctgttgttgttttattttgttcttgctccttggactccacccttgagta 503
Query: 304 ccctttcatgtctacaag 321
||||||||||||||||||
Sbjct: 504 ccctttcatgtctacaag 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_p07.g1 MSMg01no311_p07.g1 CHROMAT_FILE:
MSMg01no311_p07.g1 PHD_FILE: MSMg01no311_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:56 2005
(285 letters)
>mm_chr5_34695007_34695692
Length = 686
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 tgtgctgagtccc-gctccttcagaacagtacactgaaagtcagttattgctagcaaagc 59
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 486 tgtgctgagtccctgctccttcagaacattacactgaaagtcagttattgctagcaaagc 427
Query: 60 tccagtggtccctttcccacctcaaagatgtttcacacaaaaaggctattggtttggctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tccagtggtccctttcccacctcaaagatgtttcacacaaaaaggctattggtttggctt 367
Query: 120 gaagccctctgaggaagtagtgtggaggtggaggcaggctggcattcaaggcctatcctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaagccctctgaggaagtagtgtggaggtggaggcaggctggcattcaaggcctatcctc 307
Query: 180 tacaagccgccctgtgcctggtgtccccaggggcaattttccacctgtctccgtgagcac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tacaagccgccctgtgcctggtgtccccaggggcaattttccacctgtctccgtgagcac 247
Query: 240 cagagtctccctcacatatacggtggagcagacattgttatgtggt 285
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 246 cagagtctcccacacatatacggtggagcagacattgttatgtggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 686
Length adjustment: 9
Effective length of query: 276
Effective length of database: 677
Effective search space: 186852
Effective search space used: 186852
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
