Query= MSMg01no312_d23.b1 MSMg01no312_d23.b1 CHROMAT_FILE:
MSMg01no312_d23.b1 PHD_FILE: MSMg01no312_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:17 2005
(322 letters)
>mm_chr5_8226524_8227245
Length = 722
Score = 605 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Minus
Query: 5 gaattcagaatagaaaatcttcagattactatggtgggctaatgattgagcaagtgtaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaattcagaatagaaaatcttcagattactatggtgggctaatgattgagcaagtgtaag 254
Query: 65 ggaaaaataaagcgatatgtcaatgaacattgttttccatttaagagaggcacattctgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggaaaaataaagcgatatgtcaatgaacattgttttccatttaagagaggcacattctgg 194
Query: 125 ttttatgaaatctagccatcagaaaaatatcttctagtcagtagcaacttgatttctctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttttatgaaatctagccatcagaaaaatatcttctagtcagtagcaacttgatttctctc 134
Query: 185 tatattaagaccaaagtttgtgatgacttcagcaatagggtcttcccatcaagttctggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tatattaagaccaaagtttgtgatgacttcagcaatagggtcttcccatcaagttctggt 74
Query: 245 gggaaactaaagacagaagcaatggcctgtattgttttggcagtgtgtgggacagctctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gggaaactaaagacagaagcaatggcctgtattgttttggcagtgtgtgggacagctctg 14
Query: 305 gccaacagcttaa 317
|||||||||||||
Sbjct: 13 gccaacagcttaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_d23.g1 MSMg01no312_d23.g1 CHROMAT_FILE:
MSMg01no312_d23.g1 PHD_FILE: MSMg01no312_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:17 2005
(234 letters)
>mm_chr5_8063150_8063783
Length = 634
Score = 393 bits (203), Expect = e-114
Identities = 228/237 (96%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 1 agcgataggagtggcacagtggatccgcaggagctgcagaaggccctgacgactatgggt 60
||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 201 agcgataggagtggcaccgtggatccccaggagctacagaaggccctgacgactatgggt 260
Query: 61 ttgtgtcaccaagcagagctctccattaactgataagtctctaatgtgtgtgctcctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgtcaccaagcagagctctccattaactgataagtctctaatgtgtgtgctcctgga 320
Query: 121 agatagcctctcccccctccctccctctcccttcctctctccacctctttctgtctctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatagcctctcccccctccctccctctcccttcctctctccacctctttctgtctctaa 380
Query: 181 tgttgttgttgttgttgctgttg-t--tgttgttgttgttgtttgggacttctgttg 234
|||||||||||||| ||||| || | |||||||||| |||||||||||||||||||
Sbjct: 381 tgttgttgttgttgctgctgctgctgctgttgttgttattgtttgggacttctgttg 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
