Query= MSMg01no313_c17.b1 MSMg01no313_c17.b1 CHROMAT_FILE:
MSMg01no313_c17.b1 PHD_FILE: MSMg01no313_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:33 2005
(323 letters)
>mm_chr5_53995085_53995810
Length = 726
Score = 572 bits (296), Expect = e-168
Identities = 316/328 (96%), Gaps = 11/328 (3%)
Strand = Plus / Minus
Query: 1 gaaggactgggggagaggaaaacatcaaaaatactatatgaaaaaatgttttcaattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaaggactgggggagaggaaaacatcaaaaatactatatgaaaaaatgttttcaattaaa 465
Query: 61 aaagttttaaaaaactgatggaaacagctataaaaaa---atagaaagtttttattttat 117
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 464 aaagttttaaaaaactgatggaaacagctacaaaaaaaagatagaaagtttttattttat 405
Query: 118 atgttacaaattttatcttaaaatctagaaagtcaaactaagtatggagtcctaatttct 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atgttacaaattttatcttaaaatctagaaagtcaaactaagtatggagtcctaatttct 345
Query: 178 aatacttacagtaatttgacagttaaaaaaatacaaaaaagtcttacacagactgaggga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aatacttacagtaatttgacagttaaaaaaatacaaaaaagtcttacacagactgaggga 285
Query: 238 aaaaaacttcaacagaaaaatacatttataaatg----tttttcataaataaaatgtaaa 293
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 284 aaaaaacttcaacagaaaaatacatttataaatgcaac----tcataaataaaatgtaaa 229
Query: 294 tggacaataactacagtttaaaaacaga 321
||||||||||||||||||||||||||||
Sbjct: 228 tggacaataactacagtttaaaaacaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 726
Length adjustment: 9
Effective length of query: 314
Effective length of database: 717
Effective search space: 225138
Effective search space used: 225138
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_c17.g1 MSMg01no313_c17.g1 CHROMAT_FILE:
MSMg01no313_c17.g1 PHD_FILE: MSMg01no313_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:34 2005
(204 letters)
>mm_chr5_53829538_53830141
Length = 604
Score = 393 bits (203), Expect = e-114
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 1 gataacattgtgggactcagccctagtaggttctgcagtatagattttaaagaagtttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gataacattgtgggactcagccctagtaggttctgcagtatagattttaaagaagtttta 260
Query: 61 tgaatattttatgaatgtttaaggtgctttaggctgaaagtagtgaactctgtagggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaatattttatgaatgtttaaggtgctttaggctgaaagtagtgaactctgtagggaag 320
Query: 121 cctggtcctatccctgcagctgccagcagggagaaatcctatctcactactgcccagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggtcctatccctgcagctgccagcagggagaaatcctatctcactactgcccagggc 380
Query: 181 ccaaggcgacctgaattatagtc 203
|||||||||||||||||||||||
Sbjct: 381 ccaaggcgacctgaattatagtc 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
