Query= MSMg01no313_n10.b1 MSMg01no313_n10.b1 CHROMAT_FILE:
MSMg01no313_n10.b1 PHD_FILE: MSMg01no313_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:00 2005
(418 letters)
>mm_chr5_112042256_112043080
Length = 825
Score = 675 bits (349), Expect = 0.0
Identities = 391/409 (95%), Gaps = 9/409 (2%)
Strand = Plus / Minus
Query: 18 gaattc-aaacacatggggnagaaggaagaccttccccctactccctctaccccctccat 76
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaattcaaaacacatgggg-agaaggaagaccttccccctactccctctaccccctccat 567
Query: 77 ctcctgcccccc-------cctcaagcccccttgacagtctcctatccttttgtgctggg 129
|||||||||||| ||||||| | ||||||||||||||| |||||||||||||||
Sbjct: 566 ctcctgcccccccccccatcctcaagtctccttgacagtctcctgtccttttgtgctggg 507
Query: 130 tttccacctgctccagtggcttgtggacttatcactgtaggagacctgctccccacccca 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttccacctgctccagtggcttgtggacttatcactgtaggagacctgctccccacccca 447
Query: 190 ggagtccacctacagggactgtccttccctgtctccacagctgctgtccacagagcctgg 249
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggagcccacctacagggactgtccttccctgtctccacagctgctgtccacagagcctgg 387
Query: 250 agcatacctgggcacagagaagcccatacaatatacacaccagccacctgagctctcccc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agcatacctgggcacagagaagcccatacaatatacacaccagccacctgagctctcccc 327
Query: 310 acccccatgctgatagacacactagagtcataatggtcatttctagagatggggggagtt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acccccatgctgatagacacactagagtcataatggtcatttctagagatggggggaggg 267
Query: 370 ttttcagcagtctgtcagcaaaatctaagtgggatcagatatgtagcct 418
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tacccagcagtctgtcagcaaaatctaagtgggatcagatatgtagcct 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 825
Length adjustment: 9
Effective length of query: 409
Effective length of database: 816
Effective search space: 333744
Effective search space used: 333744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_n10.g1 MSMg01no313_n10.g1 CHROMAT_FILE:
MSMg01no313_n10.g1 PHD_FILE: MSMg01no313_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:00 2005
(373 letters)
>mm_chr5_111863389_111864161
Length = 773
Score = 690 bits (357), Expect = 0.0
Identities = 369/373 (98%)
Strand = Plus / Plus
Query: 1 atgagttacccccgaccctagcctcccagttctgggcaaggagccagagccccccctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 201 atgagttacccccgaccctagcctcccagttctgggcaaggagccagagccagccataaa 260
Query: 61 gagtctgggagctgacactacacccgcaaaactccagtgtctagcacctcaggtggggcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtctgggagctgacactacacccgcaaaactccagtgtctagcacctcaggtggggcc 320
Query: 121 tcagcaacctgcagaacggggctgaacagggagagtgatcagggagaggggggaggcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagcaacctgcagaacggggctgaacagggagagtgatcagggagaggggggaggcaga 380
Query: 181 gtgttgacagactgaggtctctctctgctgctgctgatgggtgtaaggaacggggaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgttgacagactgaggtctctctctgctgctgctgatgggtgtaaggaacggggaggcc 440
Query: 241 tgcgttggatcccctgtgctgtgtgaccttgggcaggagctccacctccctgatcactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcgttggatcccctgtgctgtgtgaccttgggcaggagctccacctccctgatcactgg 500
Query: 301 ttccttcccctgtagacaggtggactcctgtgatcttctcaagggtgggtattggctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccttcccctgtagacaggtggactcctgtgatcttctcaagggtgggtattggctgag 560
Query: 361 cagcggagaggtg 373
|||||||||||||
Sbjct: 561 cagcggagaggtg 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
