Query= MSMg01no318_e18.b1 MSMg01no318_e18.b1 CHROMAT_FILE:
MSMg01no318_e18.b1 PHD_FILE: MSMg01no318_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:27 2005
(292 letters)
>mm_chr5_35775988_35776678
Length = 691
Score = 493 bits (255), Expect = e-144
Identities = 282/291 (96%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 ttcagaggaaatctgaggaaagcctgaactttcatgggcactcaaacatcctcagcagcc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 490 ttcagaggaaatctgaggaaagcctgaactttcatgggcactcaagcatccccagcagcc 431
Query: 61 aacaggaagggagatattcagacagttttgtccctgcgcccttgtcaggatctcccaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aacaggaagggagatattcagacagttttgtccctgcgcccttgtcaggatctcccaacc 371
Query: 121 cccagatgaccatcctgttcatctgggtgtcctgggagtgagggaggtgactgggcttgg 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 370 cccagatgaccatcctgttcatctgagtgtcctgggagtgagggaggtgactgggcttgg 311
Query: 181 cttccacttgcaccttgtagcccacaacccatcctgggaggatgtgggcatgatctgtcc 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cttccatttgcaccttgtagcccacaacccatcctgggaggatgtgggcatgatctgtcc 251
Query: 241 tgtgaggtattatgtattgatggacagtgacttctctaggcagctcgggta 291
||||||||| | ||||||||||||||||||||||| ||||||||| ||||
Sbjct: 250 tgtgaggtagaaggtattgatggacagtgacttctc-aggcagctcaggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_e18.g1 MSMg01no318_e18.g1 CHROMAT_FILE:
MSMg01no318_e18.g1 PHD_FILE: MSMg01no318_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:27 2005
(293 letters)
>mm_chr5_35618083_35618775
Length = 693
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%)
Strand = Plus / Plus
Query: 1 ttcagggaggggcagagagggaaacaagccttggttttcccttggctcacccttaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 ttcagggaggggcagagagggaaacaagccttggttttcccttggctcatctttaaaaat 260
Query: 61 gagatcgcacataaacatagggaaaaatcctcagctccacttcaaataaaaagggcatcc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 gagatcgcacataaacatagggaaaaatcctcagctccatttcaaataaaaagggcatcc 320
Query: 121 tcttagacttgagacaagaaatccagctctgtttccctgaccctgtcaccagctggagct 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 321 tcttagacttgagacaagaaatccagctctatttccctgaccctgtcaccagctagagct 380
Query: 181 aagtaaaatggaagagctctgtgagcctggctctcctcagcagctccaggcaccagccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtaaaatggaagagctctgtgagcctggctctcctcagcagctccaggcaccagccaa 440
Query: 241 aggcaaagctgggcaggccagatgcgacactccctcagggagagggagaatg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcaaagctgggcaggccagatgcgacactccctcagggagagggagaatg 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
