Query= MSMg01no321_g01.b1 MSMg01no321_g01.b1 CHROMAT_FILE:
MSMg01no321_g01.b1 PHD_FILE: MSMg01no321_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:06 2005
(246 letters)
>mm_chr5_4473917_4474562
Length = 646
Score = 468 bits (242), Expect = e-136
Identities = 245/246 (99%)
Strand = Plus / Plus
Query: 1 atatgaggtctcctgttcaattattaagatgtcaagcagacaacagagcaggaaaccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatgaggtctcctgttcaattattaagatgtcaagcagacaacagagcaggaaaccaag 260
Query: 61 tgtggagccttcctagcctggggaccttgtgtgactaagtagatcatacactcctgaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggagccttcctagcctggggaccttgtgtgactaagtagatcatacactcctgaact 320
Query: 121 ggccctgaacaggagccaacagagtcacatttttctccaattctgtctttttaatgttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccctgaacaggagccaacagagtcacatttttctccaattctgtctttttaatgttgt 380
Query: 181 ttcttccatttctaaggtgtccgggatgtggtaaaatgtgtgtatatgtacatgttattt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 ttcttccatttctaaggtgtccgggatgtggtaaaatgtgtgtatatgtacatgctattt 440
Query: 241 ttagac 246
||||||
Sbjct: 441 ttagac 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no321_g01.g1 MSMg01no321_g01.g1 CHROMAT_FILE:
MSMg01no321_g01.g1 PHD_FILE: MSMg01no321_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:06 2005
(158 letters)
>mm_chr5_4669173_4669730
Length = 558
Score = 298 bits (154), Expect = 1e-85
Identities = 157/158 (99%)
Strand = Plus / Minus
Query: 1 ttttcagagacttcctgttttctacttagatgttggctgctcccacttagcatcactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttttcagagacttcctgttttctacttagatgttggctgctcccacttagcatcactttt 299
Query: 61 aagaaacccaggactttcaattgttcctagaagcttgggttgccacccatagcatactgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 298 aagaaacccaggactttcaattgttcctagaagcttgggttgccacccatagtatactgg 239
Query: 121 taactggcccagaagatgagtttcaaaccattcagtta 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 taactggcccagaagatgagtttcaaaccattcagtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
