Query= MSMg01no323_m22.b1 MSMg01no323_m22.b1 CHROMAT_FILE:
MSMg01no323_m22.b1 PHD_FILE: MSMg01no323_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:47 2005
(673 letters)
>mm_chr5_150965371_150966445
Length = 1075
Score = 1056 bits (546), Expect = 0.0
Identities = 638/686 (93%), Gaps = 30/686 (4%)
Strand = Plus / Plus
Query: 1 tattgccacaccctgtctaatgtagagtattaatagttctttggtttctgccctaatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattgccacaccctgtctaatgtagagtattaatagttctttggtttctgccctaatcac 260
Query: 61 caaatacacagccccc--aagccacaggagaaatgaccaggtttgacggagaattaaaga 118
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 caaatacacagcccccccaagccacaggaaaaatgaccaggtttgacggagaattaaaga 320
Query: 119 aagtatatctgctccaggagaagacctactatgtgtgcactgtgcttg-----------c 167
|||||||||||||||||||| | ||||||||||||||||| |
Sbjct: 321 aagtatatctgctccaggag---------tgtgtgtgcactgtgcttgagctgtgcttgc 371
Query: 168 tatagtcaaatttcaactgatgatacatacacatacctcctaagaccaagcacaaatgca 227
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 372 tatagtcaaatttcaactggtgatacatacccatacctcctaagaccaagcacaaatgca 431
Query: 228 tacaaacacatacgtacatgcagacaggcacacatatattcaaacttatacatgtatatg 287
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
Sbjct: 432 tacaaacacatacgtacatgcaggcaggcacacatatattcaaacacatacatgtatacg 491
Query: 288 tacctgcacacatgcatgcacacagacacacagcaaaacactatcccacacaactgactc 347
||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 492 tacctgcacacatgcttgcacacag--------caaaacactatcccacacaactgactc 543
Query: 348 tccaaagaacccttaaatttccatttcaaatatgtttatatgaactcctcatgaatcaaa 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tccaaagaacccttaaatttccatttcaaatatgtttatatgaactcctcatgaatcaaa 603
Query: 408 ctctaactgtgtctttgtatcatattgctagataattcagtgactctgaagctgcagtag 467
|| ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 604 ctttaactgtgtctttgtatcagattgctagataattcagcgactctaaagctgcagtag 663
Query: 468 attgcatcactcagggccaccgaattgatccagacacaaaaacacacagacaactggaca 527
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 attgcatcactcagggcgaccgaattgatccagacacaaaaacacacagacaactggaca 723
Query: 528 gatgcagtctgcgatcagcatgagtctgatcgatacagcttctgacagcatgcgtgcatg 587
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 724 gatgcagtctgcgatcagcatgagtctgatcaatacagcttctgacagcatgcgtgcatg 783
Query: 588 cgtgcacgggtgagctgcagtgttttggattgcctgttctgagatgaggacatccaagct 647
|||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 784 cgtgcatgggtgagctgcagtgttttggattgcctgttttgagatgaggacacccaagct 843
Query: 648 cactgacccccagggtcacactcaac 673
||||||||||||||||||||||||||
Sbjct: 844 cactgacccccagggtcacactcaac 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1075
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1065
Effective search space: 706095
Effective search space used: 706095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_m22.g1 MSMg01no323_m22.g1 CHROMAT_FILE:
MSMg01no323_m22.g1 PHD_FILE: MSMg01no323_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:47 2005
(214 letters)
>mm_chr5_151126182_151126795
Length = 614
Score = 404 bits (209), Expect = e-117
Identities = 212/213 (99%)
Strand = Plus / Minus
Query: 1 atggctttgggaagagaaatctacttgacatttcaacattacagatatcatcttttacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atggctttgggaagagaaatctacttgacatttcaacattacagatatcatcttttacgt 354
Query: 61 cagtatggatctatcagtatcctggggtcctgaaagcagagggcatgaagatgtgtcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cagtatggatctatcagtatcctggggtcctgaaagcagagggcatgaagatgtgtcaag 294
Query: 121 ggtctgaggcatgagggcggatgtgtttggggttcttgtagaatggaagggtgagtgttg 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 293 ggtctgaggcatgagggcggatgtgattggggttcttgtagaatggaagggtgagtgttg 234
Query: 181 aggggcttggggaatgagtggtggatgtgtttg 213
|||||||||||||||||||||||||||||||||
Sbjct: 233 aggggcttggggaatgagtggtggatgtgtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
