Query= MSMg01no324_g08.b1 MSMg01no324_g08.b1 CHROMAT_FILE:
MSMg01no324_g08.b1 PHD_FILE: MSMg01no324_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:42 2005
(695 letters)
>mm_chr5_141860063_141861157
Length = 1095
Score = 1274 bits (659), Expect = 0.0
Identities = 683/691 (98%)
Strand = Plus / Minus
Query: 5 gaattcttacatctcccttcataattgccactttcaagtgacatactttaatctgaagct 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 gaattcttacatctgtcttcataattgccactttcaagtgacatactttaatctgaagct 836
Query: 65 cacaaaatgtatattttgaaactcagacatctcacagcattctgcctcttggcggtggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 cacaaaatgtatattttgaaactcagacatctcacagcattctgcctcttggcggtggag 776
Query: 125 aacttgccttacagcttctaacttgctgctttgttttgagtgccggcccctccgtgactc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aacttgccttacagcttctaacttgctgctttgttttgagtgccggcccctccgtgactc 716
Query: 185 agtttctccaccagccacccttattagcctctaaggattccttcccactcccatccattc 244
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 715 agtttctccaccagccacccttatcagcctctaaggattccttcccactcccatccattc 656
Query: 245 cttttcaaatcagtctcttaagctggtctttggaagctccaagcttaaacatcatccaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cttttcaaatcagtctcttaagctggtctttggaagctccaagcttaaacatcatccaga 596
Query: 305 aaaaaacctctttggatttaagctgaaagccaggacacttcactgttcctcacgttcacc 364
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aaaaaacctctttggatccaagctgaaagccaggacacttcactgttcctcacgttcacc 536
Query: 365 acaggaaactggaggtgagagaacacgtgagccccacaagtggagaacatccacttggag 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 535 acaggaaactggaggtgagagaacacgtgagccccacaagtggagaatatccacttggag 476
Query: 425 ggagcctcagctgacaaagtgacaactcatgcacaagagaactgcagatctttcctaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggagcctcagctgacaaagtgacaactcatgcacaagagaactgcagatctttcctaaga 416
Query: 485 cgtgcctggtcttcagaaagcaggagagatagaggagccccagcaatagcacacagccaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cgtgcctggtcttcagaaagcaggagagatagaggagccccagcaatagcacacagccaa 356
Query: 545 agtgtaaatgtatgttctcaggacaccgccacaatttatacgtcacctttgaactagggg 604
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 355 agtgtaaatgtatgttctcaggacaccgccacaatttatacgtcgcctttgaactagggg 296
Query: 605 agaacattacacctgtgagtgtaatgctcatcatcaaatgtgcgagagcaagcctcacac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agaacattacacctgtgagtgtaatgctcatcatcaaatgtgcgagagcaagcctcacac 236
Query: 665 acatgggaagctctcacgccagcggcaggct 695
||||||||||||||||| |||||||||||||
Sbjct: 235 acatgggaagctctcacaccagcggcaggct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_g08.g1 MSMg01no324_g08.g1 CHROMAT_FILE:
MSMg01no324_g08.g1 PHD_FILE: MSMg01no324_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:42 2005
(325 letters)
>mm_chr5_141769495_141770218
Length = 724
Score = 592 bits (306), Expect = e-173
Identities = 321/326 (98%), Gaps = 2/326 (0%)
Strand = Plus / Plus
Query: 1 caaaactttataactcatatttctcatgaacttagagactattaccttcaaaaattacca 60
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 200 caaagctttataactcatatttctcatgaacttagagactattatcttcaaaaattacca 259
Query: 61 gtgaattaaatccaacaacatatctaatataatcaaaagaggtttgtttcaagcacttaa 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 260 gtgaattaaatccaacaacatatctaatataatcaaaagaggtttatttcaagcacttaa 319
Query: 121 a-ttctattgaacatttgtaagtcacttaaatctgtcatatgatctgccagttgatttcc 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agttctattgaacatttgtaagtcacttaaatctgtcatatgatctgccagttgatttcc 379
Query: 180 ctaaaggcacttagtaaaacccaacatcattaatgattaaatgttagaaaatcagaaata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctaaaggcacttagtaaaacccaacatcattaatgattaaatgttagaaaatcagaaata 439
Query: 240 aaatagatttctttttctcaactacataaagagtatttcccctaaactacctctggccaa 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaatagattt-tttttctcaactacataaagagtatttcccctaaactacctctggccaa 498
Query: 300 gagcaaattttccattgaaaaatggg 325
||||||||||||||||||||||||||
Sbjct: 499 gagcaaattttccattgaaaaatggg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
