TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXGCCCATACCTAAGCATAGTAAAAGCAATATACAGAAAATCAG
TAGCCAACATCAAAGTAAATGTAGAGAAACTTGAAGCAATCCTACTAAAA
TCAGGGACTAGACATGGCTGCCCACTCTATCCCTACCTATTCAATATAGT
ACTTGAAGTCCTAGCCAGAACAATTAGACAACAACAACAACAAAAAAGTC
AAGGGTATACAAATCCAAAAGGAAGAAGTCAAAATATCACTGTTTGCAGA
TGATATTATAGTCTACTTAAGTGACCCCAAAAATTACATCAGAGCACTCC
TAAACCTGATAAACAACATCAACCAAGTGGCCGGATATAAAATTAACTCA
AACAAATCAGTAGCTTTCCTGTACTCAAAGGTTAAACAGTCTGAGAAAGA
AATTAGGAACACGACACCCTTCACAATAGTCACAAATAATATAAAATAAT
TTGGTGTGACTTTAATCAAGCAAATGAAATATCTGTATGACAAGAACTTC
AAGTCTCTGAAGAAAGAAATCGAAGAAGATCTCAGAAAATGGAAAAAATC
TCCCATGCTCATTGATTGGCAGGATTAATATAGTAAAAATGGCCATCTTG
CCGAATGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACACA
AATTCTTCATAGAGTTAGAAAGAACGATTTGCAAATN

CAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAGGACAGAGAAAGCTTTCTTTAAA
CTGTTTGATTTTCATATAGCTAGATGGATGCTTTGGGGAAAGAAGATTAA
GCACTGTGTTTACTTTAAGTAAAGTTCCACAAATGCAAAATACACTTTTT
TTTTTAATTTAGGTTTCATGTTGAAATTGTGACTTAAACATGCTTTGATC
TTTTTACCTCACAAAGGATGAGTTTTTGAAACGGCATTGTTTGAATACCA
ATGATTTATCTATTTCCTTGAATTCAACGATATAATAAAAATCTAAGAAT
TTAAAAGCATCACTCTGTTTCTATGTACATTGCTTCTCTACATGTGTGTG
TTTGTGAGAGTGAGTGCTTGCTGCGGCAGCATGTATGGAGCTCAAAGGAC
ATTCTTGGGCTTGCTTCTCACTTGCCACCTTCATTAAGATGGGTCTTTTT
GTTCAATGTTGTGAACTTGAGGCTAGCTGGCCCATGGACTTCCAGAGATT
GTCCTGTTCCTTTCACTGTGGCACTGCTGACATCACATGTACATGCTTCC
ATGTCTCTCTTGATATGGGTTCTGAGACTTCAACCTCAGGACTTCACACT
TGGGTAGTCTGCATTCAGCTACAGGACGATCTCACTAGCCCTAAAACACT
TTTAAAATTGGATCCATGTGGCTGAGTGGAAAT

Query= MSMg01no325_l10.g1 MSMg01no325_l10.g1 CHROMAT_FILE:
MSMg01no325_l10.g1 PHD_FILE: MSMg01no325_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:16 2005
         (658 letters)



>mm_chr5_46576593_46577654
          Length = 1062

 Score = 1174 bits (607), Expect = 0.0
 Identities = 647/663 (97%), Gaps = 6/663 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaggacagagaaagctttctttaaactgtttgattttcatatagctagatggatgctttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 aaggacagagaaagctttctttaaactgtttgattttcatatagctagatggatgctttg 803

                                                                       
Query: 61  gggaaagaagattaagcactgtgtttactttaagtaaagttccacaaatgcaaaatacac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gggaaagaagattaagcactgtgtttactttaagtaaagttccacaaatgcaaaatacac 743

                                                                       
Query: 121 ttttttttttaatttaggtttcatgttgaaattgtgacttaaacatgctttgatcttttt 180
            |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 742 -ttttttttaaatttaggtttcatgttgaaattgtgacttaaacatgctttgatcttctt 684

                                                                       
Query: 181 acctcacaaaggatgagtttttgaaacggcattgtttgaataccaatgatttatctattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acctcacaaaggatgagtttttgaaacggcattgtttgaataccaatgatttatctattt 624

                                                                       
Query: 241 ccttgaattcaacgat-----ataataaaaatctaagaatttaaaagcatcactctgttt 295
           ||||||||||||||||     |||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ccttgaattcaacgatatataataataaaaatctaagaatttaaaagcatcactctgttt 564

                                                                       
Query: 296 ctatgtacattgcttctctacatgtgtgtgtttgtgagagtgagtgcttgctgcggcagc 355
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 563 ctatgtacattgcttctctacgtgtgtgtgtttgtgagagtgagtgcttgctgtggcagc 504

                                                                       
Query: 356 atgtatggagctcaaaggacattcttgggcttgcttctcacttgccaccttcattaagat 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 503 atgtatggagctcaaaggacattcttgggcttgcttctcacttgccaccttcattgagat 444

                                                                       
Query: 416 gggtctttttgttcaatgttgtgaacttgaggctagctggcccatggacttccagagatt 475
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 443 gggtctttttgttcaatgttgtgaactcgaggctagctggcccatggacttccagagatt 384

                                                                       
Query: 476 gtcctgttcctttcactgtggcactgctgacatcacatgtacatgcttccatgtctctct 535
           ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 383 gtcctgttcctctcactgtggcactgctgacgtcacatgtgcatgcttccatgtctctct 324

                                                                       
Query: 536 tgatatgggttctgagacttcaacctcaggacttcacacttgggtagtctgcattcagct 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgatatgggttctgagacttcaacctcaggacttcacacttgggtagtctgcattcagct 264

                                                                       
Query: 596 acaggacgatctcactagccctaaaacacttttaaaattggatccatgtggctgagtgga 655
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acaggacgatctcaccagccctaaaacacttttaaaattggatccatgtggctgagtgga 204

              
Query: 656 aat 658
           |||
Sbjct: 203 aat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1062
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1052
Effective search space:   681696
Effective search space used:   681696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)