Query= MSMg01no325_p23.b1 MSMg01no325_p23.b1 CHROMAT_FILE:
MSMg01no325_p23.b1 PHD_FILE: MSMg01no325_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:37 2005
(183 letters)
>mm_chr5_49450691_49451273
Length = 583
Score = 354 bits (183), Expect = e-102
Identities = 183/183 (100%)
Strand = Plus / Minus
Query: 1 agtgcaaggccaagtcatacagtgagaagacaagacttgtcatagatttcaaatttcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agtgcaaggccaagtcatacagtgagaagacaagacttgtcatagatttcaaatttcagt 324
Query: 61 ttttgaaggtgtctgatatgtcctgggcatatcatttcatatttatgtcttactataatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttttgaaggtgtctgatatgtcctgggcatatcatttcatatttatgtcttactataatc 264
Query: 121 tatagggaaagatgttgcatgcctggtttccagagtagaagactggggaggctcatgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tatagggaaagatgttgcatgcctggtttccagagtagaagactggggaggctcatgaga 204
Query: 181 gtt 183
|||
Sbjct: 203 gtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no325_p23.g1 MSMg01no325_p23.g1 CHROMAT_FILE:
MSMg01no325_p23.g1 PHD_FILE: MSMg01no325_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:37 2005
(622 letters)
>mm_chr5_49288021_49289042
Length = 1022
Score = 1176 bits (608), Expect = 0.0
Identities = 617/622 (99%), Gaps = 4/622 (0%)
Strand = Plus / Plus
Query: 1 actcagagcctgaaaaagctaatgtaatccagaccccttgcctaggtgctctctgggtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcagagcctgaaaaagctaatgtaatccagaccccttgcctaggtgctctctgggtgt 260
Query: 61 tatgttctcccacttattgggcaatgacccattctgacacacagagcatcagtgggaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgttctcccacttattgggcaatgacccattctgacacacagagcatcagtgggaaca 320
Query: 121 tatgtgatctacaagatgcggggctaaggctttcactacataagtgcaagatgtatttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtgatctacaagatgcggggctaaggctttcactacataagtgcaagatgtatttga 380
Query: 181 tcctacaaaataaactgaaaaaaaaatacacaagacattaaatgaaacatacatttcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctacaaaataaactgaaaaaaaaatacacaagacattaaatgaaacatacatttcaac 440
Query: 241 atatttgaagagatggtggtctacatttatggacctagcactagaaaagggaggatgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatttgaagagatggtggtctacatttatggacctagcactagaaaagggaggatgctg 500
Query: 301 gaattccagagacctcactgtgttgggagccctgtgattgtgcagcgagggaaatacaag 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 gaattccagagacctcactgtgttgggagccctgtgattgtgcagtgagggaaatacaag 560
Query: 361 gccctcagaacagaaactgcctcattgtaaatgctcagtgaagggtggttatacttcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccctcagaacagaaactgcctcattgtaaatgctcagtgaagggtggttatacttcctt 620
Query: 421 tctttctttctttcttcttttctttcttttcttttttaactgtttattgaacctttttat 480
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctttctttctt----cttttctttcttttcttttttaactgtttattgaacctttttat 676
Query: 481 accctgatggctcttctaattgctttatatcatttatctcaattaaaccagaaaactcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 accctgatggctcttctaattgctttatatcatttatctcaattaaaccagaaaactcaa 736
Query: 541 tgagttgagcactaacactgttcccaactcctgtacagacaagaaagaaagaggtatcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgagttgagcactaacactgttcccaactcctgtacagacaagaaagaaagaggtatcat 796
Query: 601 cagtagagctggaactctgaag 622
||||||||||||||||||||||
Sbjct: 797 cagtagagctggaactctgaag 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
