Query= MSMg01no326_i22.b1 MSMg01no326_i22.b1 CHROMAT_FILE:
MSMg01no326_i22.b1 PHD_FILE: MSMg01no326_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:17 2005
(372 letters)
>mm_chr5_29833456_29834227
Length = 772
Score = 630 bits (326), Expect = 0.0
Identities = 358/370 (96%), Gaps = 4/370 (1%)
Strand = Plus / Plus
Query: 3 ggaattctgaggtttcc--gtgttcctcttgtggacaccatgcctgttgctctaacagtg 60
|||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 203 ggaattctgagg--tcccagtgttcctcttgtgggcaccatgcctgttgctctaacagtg 260
Query: 61 ccttgcaaagccttatcagtagagctgtgacaggggctcttaggcattgtgaggctggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttgcaaagccttatcagtagagctgtgacaggggctcttaggcattgtgaggctggtc 320
Query: 121 ccctaaagtgctcagcagtcctagggcagctgggtcttgtattgacattaaatttagttg 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccttgagtgctcagcagtcctagggcagctgggtcttgtattgacattaaatttagttg 380
Query: 181 acactgcaaactactgcagtggttcagctgcgagtgtgtggatcaggagaacactcattg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 acactgcaaactactgcagtggttcagctgcgagtgtgtggatcaggagaacactcgttg 440
Query: 241 agtccaaggccgtagaggaagggctgaggctctcatgtgggcttgctgccctgggtcctg 300
| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 441 aatccaaggccgtagaggaagggctgaggctctcaggagggcttgctgccctgggtcctg 500
Query: 301 gccacaccctttcctttctattctggtccctagccagttgagtcctacaggctcctcagg 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccacaccctttcctttctgttctggtccctagccagttgagtcctacaggctcctcagg 560
Query: 361 agttactttc 370
||||||||||
Sbjct: 561 agttactttc 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_i22.g1 MSMg01no326_i22.g1 CHROMAT_FILE:
MSMg01no326_i22.g1 PHD_FILE: MSMg01no326_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:17 2005
(249 letters)
>mm_chr5_30014293_30014941
Length = 649
Score = 449 bits (232), Expect = e-131
Identities = 244/248 (98%)
Strand = Plus / Minus
Query: 1 cactaatgctgctgaggacatcggtgtgctctctaatgtggatgctgtgcgatgtgatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 448 cactaatgctgctgaggacatcggtgtgctctctaatgtggatgctgtgtgatgtgatgt 389
Query: 61 tcccacttctgacctggagagctgctcagccttgtattcctaccaccgggttgtcacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tcccacttctgacctggagagctgctcagccttgtattcctaccaccgggttgtcacaac 329
Query: 121 gtgatgaagagacacaagaaagacaagcctgatcagcttgtaaatagattaaagtgctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 328 gtgatgaagagacacaagaaagacaagcctgatcagcttgtaaatagattaaaatgctat 269
Query: 181 gattcatcagttgctgctgagtagtagctggatagggggctgcatggagagtggacattg 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gattcatcagttgctgctgagcagtagctggatagggggctgcatggagagtggacattg 209
Query: 241 tgcctgtc 248
||||||||
Sbjct: 208 tgcctgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
