Query= MSMg01no327_m24.b1 MSMg01no327_m24.b1 CHROMAT_FILE:
MSMg01no327_m24.b1 PHD_FILE: MSMg01no327_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:47 2005
(613 letters)
>mm_chr5_77429150_77430161
Length = 1012
Score = 1087 bits (562), Expect = 0.0
Identities = 597/614 (97%), Gaps = 11/614 (1%)
Strand = Plus / Minus
Query: 5 gaattccactgggagccacacaaaagggctgctattcacaactgtcagctaaggacaaag 64
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 812 gaattccactgggagccaca-aaaagggctgctattcacaattgtcagctaaggacaaag 754
Query: 65 attgcaggtcctgacagctagtcaggaaagataccaaaacaaaacaactccagaacaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 attgcaggtcctgacagctagtcaggaaagataccaaaacaaaacaactccagaacaaag 694
Query: 125 caaacaaaaacagaaagcaaattgagcccaagtttagtcaccctccttgaccagtatgta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 caaacaaaaacagaaagcaaattgagcccaagtttagtcaccctccttgaccagtatgta 634
Query: 185 gtaacttaagtgaggtggcatcttgagctcgctgaggaactgacccaggaggttgcataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gtaacttaagtgaggtggcatcttgagctcgctgaggaactgacccaggaggttgcataa 574
Query: 245 tttcccaaggttagtttttaggaatgggggagtaagtcatcgataaagaccctgaggtcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tttcccaaggttagtttttaggaatgggggagtaagtcatcgataaagaccctgaggtcc 514
Query: 305 tgctcagtaaagagagattacattaggacatggttgcctccagcctggatcttagcactg 364
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 513 tgctcagtaaagagagattacattaggacatggttgcctccggcctggatcttagcactg 454
Query: 365 gggagctgagaaaacagacccccac-----ctcagactgaagaagctacagggagtttaa 419
|||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 453 gggagctgagaaaacaga-----gcttaggctcagactgaagaagctacagggagtttaa 399
Query: 420 tgccaggctagcatgttgagacccctttctccctccaccacagggaaaaatacagttcct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgccaggctagcatgttgagacccctttctccctccaccacagggaaaaatacagttcct 339
Query: 480 acatgaaattgaatttcttttgttagatattccaaatacgttagcaaaggagcaacggcg 539
|||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 338 acatgaaattgagtttcttttgttagatattccaaatatgttagcaaaggagcgacggcg 279
Query: 540 agtcccaggaggcttgagcggtagatgggacgggttttaaggttagttatcttgagtggg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agtcccaggaggcttgagcggtagatgggacgggttttaaggttagttatcttgagtggg 219
Query: 600 cttgaaaatattag 613
||||||||||||||
Sbjct: 218 cttgaaaatattag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1012
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1002
Effective search space: 604206
Effective search space used: 604206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_m24.g1 MSMg01no327_m24.g1 CHROMAT_FILE:
MSMg01no327_m24.g1 PHD_FILE: MSMg01no327_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:47 2005
(354 letters)
>mm_chr5_77265873_77266626
Length = 754
Score = 646 bits (334), Expect = 0.0
Identities = 346/350 (98%)
Strand = Plus / Plus
Query: 1 ttcttgcggatccaccataatactgggaaactcgagcagctgcatcttacccctctgctg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 ttcttgcggatccaccataatactgggatactcgagcagctgcatcttacccctctgctg 260
Query: 61 tccccattccaaaaaagatcctaattctctcctgcttcctctcttcctccatccaaccca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcccattccaaaaaagatcctaattctctcctgcttcctctcttcctccatccaaccca 320
Query: 121 gaagtcctgcctactcgcccagtgattggctggctcctttattcattgggtgattggttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagtcctgcctactcgcccagtgattggctggctcctttattcattgggtgattggttc 380
Query: 181 acaagaagagcaccaggcccacccacaacagagagtgggaggacggggaagagaactggg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 acaagaagagcaccaggcccacccacaacagagagggggaggacggggaagagaactggg 440
Query: 241 gagagtaggatttgatttgtgtagcaatgcagaatttgtgtagaatagcatcttgggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagagtaggatttgatttgtgtagcaatgcagaatttgtgtagaatagcatcttgggaaa 500
Query: 301 aaaccaaagcagagctgaaaacaaattagagagtaagacttagagagtat 350
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaccaaaacagagctgaaaacaaattagagagtaagacttagagagtat 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
