TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATTATATCTTTTCCCTCATGCCATCCACTGTGTTCCCAGTATCCA
GCTGTTTATTGCCATGCATTCTCAGTCAGAGTCAAGTTCTCAACAATGGT
ATGTGAGGCGTCTCTTTCCCTTCTTACCCTGCTCCCTTTTCTCTATTGAT
AATTTTGTCCAGATTAGAAAACATCTATATAGTAGTCAAATTAATGAAAG
AATGAATTTAAGAGAAAAATGACTCTACTGATATAATAGAACATGTCTCT
GTGGACTGTCTCTATTATATTCAGCTTCAGGTTAAGCATTCCAGAACACT
TCAAGAAACATGTACTCATTTGTCTGTGAAACGTAACGTCGTTAACTCTT
TCATTTAGAAAGAACACCTTTAAAGATATCACTCCGGATGTTCCAGAGCA
GATATCCTCAAATCACGCACTAGAATAACAGAAGAGATCTGAGAATATAT
TTGAAAAAAAAATCAGAGTAGAACATAAAGTTTGAGCAGAATATGAAGAG
TGTGGGCTGTTCAAGTGTACAAGAGTCTGCAATTGCTGAGGTTAGTTTTC
CATTCTGTTTTCCGCACAATTTTGTCTTATGATAATGAGGCTGCCTGAGC
CTGTAGGTCCTCCTGCCTCTTTATGTTGCTTTCACCATCTCTTCTCTGCT
TCCGACCTTACTAGCGGATCCACTGCTTCCCATTCATTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTATTCCCCGCGGAATTCTTTGTTTAGCTTTGCAACCCAT
TTTTTTAATAGAGTTATTTGGATTTCTGGAGTCCAACTTCTTGAGTTCTT
TATATATATTGGATATTAGCCCCCTATCGGATTTAGGATTGGTAAAGATC
CTTTCCCAATCTGTTGGTTGCCTTTTGGTCTTATTGAGAGTGTCTTTTGC
CTTACAGAAGCTTTGCAGTTTTATGAGGTCCTATTTGTCGATTCTTAATC
TTACGGCACAAGCCATTGGTGTTCTGTTCAGGAATCTTTCCCCTGTGCCT
ATATCTTTGAGGCTTTTCCCCACTGTGGATGCTCACAATCATCCATTGGA
CAGAGCTCTAGATCCCCACCGAAGGAACCTGAGAAAGTACCCAAGGAGCT
GAAGGGTTCTGAAGGTCCATAGGAGGAACATCAATATGATCTAATCACTA
CTCCCAGAGCCTCCTTGGAATTAACCACCCATTTTTGATTACACCTGTCG
CATCTTGTGTTTCTAGCTGCATACGTTTCCTAGTTTGCCTTATTTCGCTT
CTCATTTTGAGGAAAGGACCTATGCTCTGCGAAAGTTTCATGTTTCGTTA
TCCCGCTTTTTCCTTTCCCCCCCTTTTTCCATTTTTTTGCCCTTTTCCCC
CCTTTTTCTACCCCCTTTCTCCCTTTTTTTCCTTTTTTTTTCC

Query= MSMg01no329_f09.b1 MSMg01no329_f09.b1 CHROMAT_FILE:
MSMg01no329_f09.b1 PHD_FILE: MSMg01no329_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:45 2005
         (596 letters)



>mm_chr5_57339836_57340832
          Length = 997

 Score = 1007 bits (521), Expect = 0.0
 Identities = 573/591 (96%), Gaps = 3/591 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctattatatcttttccctcatgccatccactgtgttcccagtatccagctgttta 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gaattctattatatattttccctcatgccatccactgtgttcccagtatccagctgttta 735

                                                                       
Query: 65  ttgccatgcattctcagtcagagtcaagttctcaacaatgg--tatgtgaggcgtctctt 122
           |||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||
Sbjct: 734 ttgccatgcattctcagtcagagtcaagttctcagcaatggtatatgtgaggagtctctt 675

                                                                       
Query: 123 tcccttcttaccctgctcccttttctctattgataattttgtccagattagaaaacatct 182
           ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tcccttcctaacctgctcccttttctctattgataattttgtccagattagaaaacatct 615

                                                                       
Query: 183 atatagtagtcaaattaatgaaagaatgaatttaagagaaaaatgactctactgatataa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 614 atatagtagtcaaattaatgaaagaatgaatttaagagaaaaatgactctagtgatataa 555

                                                                       
Query: 243 tagaacatgtctctgtggactgtctctattatattcagcttcaggttaagcattccagaa 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tagaacatgtctctgtggactgtctctattatattcagcttcaggttaagcattccagaa 495

                                                                       
Query: 303 cacttcaagaaacatgtactcatttgtctgtgaaacgtaacgtcgttaactctttcattt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cacttcaagaaacatgtactcatttgtctgtgaaacgtaacgtcgttaactctttcattt 435

                                                                       
Query: 363 agaaagaacacctttaaagatatcactccggatgttccagagcagatatcctcaaatcac 422
           |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 434 agaaagaatacctttaaagatatcactctggatgttccagagcagatatcctcaaatcac 375

                                                                       
Query: 423 gcactagaataacagaagagatctgagaatatatttgaaaaaaaaatcagagtagaacat 482
           |||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 374 gcactagaataacagaagagatctgaaaatatatttggaaaaaaa-tcagagtagaacat 316

                                                                       
Query: 483 aaagtttgagcagaatatgaagagtgtgggctgttcaagtgtacaagagtctgcaattgc 542
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 315 aaagtttgagcagaatatgaagagtgttggctgttcaagtgtacaagagtctgcaactgc 256

                                                              
Query: 543 tgaggttagttttccattctgttttccgcacaattttgtcttatgataatg 593
           |||||||||||||||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 255 tgaggttagttttccattctgttttccgtacatttttgtcttatgagaatg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 997
Length adjustment: 10
Effective length of query: 586
Effective length of database: 987
Effective search space:   578382
Effective search space used:   578382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)