CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGCCTCAAAACTCTTTCCTATCTCCCACAGATGGGCCCCTACCCAT
GCCCCAGGGACACCAAAAAAGACATAACCCTATTACTGATTTCATGAAGC
TTCAGAAAGTTCCATGATTGAGATTTCTAGTCACAAGAGAAAGGGGGATG
AGAGGCCAAATATTTTAAGTTCAGACTCCATTTTAGAGAACCTGACCTAA
GTTTGAACTCAGGTAAACTTATGTTACCTGGCATTAGTTTCCAAGTTGCC
CTCAACAAAACCTGAGTCTAGCTTCCATCTCTAGGCTAATTCCCAACAAG
AACAGAGTTTTCAGGTTATACCCTCAACAAGGCCAGTGTCTCCAGTTCAT
TCCCCCCAAAATCCTGAACCCCAGGTTATAAGCCCACACTTTGCCTAACA
ACCACTACTGCAGAGTGAAACAGAAGGTTTATGTGTGATATGACTCCAAG
TACCAGCCAATTATGTTAAATGCCACAGTAGCTTTTCAATTAGATGCTTG
CACATGTACTCCCTGTTTACTGCTTACTATTAGAGTCTTGCCCCAATAGA
CATTAGGCCCTCAACCACCACTAAAACAGTTCTGCATGATGGAAGTTAGT
TGGNGGTGAAGGAGGTGCCACACTAGACTGAATAGAATAACGGTCCAGCT
GTGAGTTTTATCCCACCCGCTCCTGTGCGTTTTTTGCGGGAACACTACTA
TTCCCCGGCCCAATTCCATA

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGTTCAACATCCTTAATCGTCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGATAGAGGAAC
ACTCCTCCATTGTTGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATC
AGTCTGGCCGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGATCCAG
CAATACCTCTCTTGGGTATATAACCAGAAGATGCCCCAACTGGTAAGAAG
GACACATGTTCCACTATGCCCATAGCAGCCTTATTTGTAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAAAAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGGGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACTAAGGAACTCACACAATATGTACTCACTGATAATTG
GATATTAGTCCAAAACCTATGATACCCCAGATGTAAGATATACTTTCCTA
AACACAGGAAACTCCCGAATAATGAAGACTGAAGTGTGGACACTATGCCC
CTTCCTAAATAGTGGAAAN

Query= MSMg01no329_p19.b1 MSMg01no329_p19.b1 CHROMAT_FILE:
MSMg01no329_p19.b1 PHD_FILE: MSMg01no329_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:37 2005
         (620 letters)



>mm_chr5_95991938_95992957
          Length = 1020

 Score = 1154 bits (597), Expect = 0.0
 Identities = 611/616 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagcctcaaaactctttcctatctcccacagatgggcccctacccatgccccagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcctcaaaactctttcctatctcccacagatgggcccctacccatgccccagg 264

                                                                       
Query: 65  gacaccaaaaaagacataaccctattactgatttcatgaagcttcagaaagttccatgat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacaccaaaaaagacataaccctattactgatttcatgaagcttcagaaagttccatgat 324

                                                                       
Query: 125 tgagatttctagtcacaagagaaagggggatgagaggccaaatattttaagttcagactc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgagatttctagtcacaagagaaagggggatgagaggccaaatattttaagttcagactc 384

                                                                       
Query: 185 cattttagagaacctgacctaagtttgaactcaggtaaacttatgttacctggcattagt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattttagagaacctgacctaagtttgaactcaggtaaacttatgttacctggcattagt 444

                                                                       
Query: 245 ttccaagttgccctcaacaaaacctgagtctagcttccatctctaggctaattcccaaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttccaagttgccctcaacaaaacctgagtctagcttccatctctaggctaattcccaaca 504

                                                                       
Query: 305 agaacagagttttcaggttataccctcaacaaggccagtgtctccagttcattcccccca 364
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agaacagagttttcaggttacaccctcaacaaggccagtgtctccagttcattcccccca 564

                                                                       
Query: 365 aaatcctgaaccccaggttataagcccacactttgcctaacaaccactactgcagagtga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaatcctgaaccccaggttataagcccacactttgcctaacaaccactactgcagagtga 624

                                                                       
Query: 425 aacagaaggtttatgtgtgatatgactccaagtaccagccaattatgttaaatgccacag 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 625 aacagaaggtttatgtgtgatatgactccaagtaccagccaattatgttaaaggccacag 684

                                                                       
Query: 485 tagcttttcaattagatgcttgcacatgtactccctgtttactgcttactattagagtct 544
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 685 tagcttttcaattagatgcttgcacatgtactccctgtttactgcttactattacagtct 744

                                                                       
Query: 545 tgccccaatagacattaggccctcaaccaccactaaaacagttctgcatgatggaagtta 604
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgcctcaatagacattaggccctcaaccaccactaaaacagttctgcatgatggaagtta 804

                           
Query: 605 gttggnggtgaaggag 620
           ||||| ||||||||||
Sbjct: 805 gttgggggtgaaggag 820


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)