Query= MSMg01no330_e23.b1 MSMg01no330_e23.b1 CHROMAT_FILE:
MSMg01no330_e23.b1 PHD_FILE: MSMg01no330_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:00 2005
(344 letters)
>mm_chr5_134351307_134352050
Length = 744
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Plus
Query: 1 agactgagatcaacaccatccttagctatgtgctaagtgtgcggccagtatggctatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agactgagatcaacaccatccttagctatgtgctaagtgtgcggccagtatggctatatg 260
Query: 61 actctgcatttaaaataaatttaaaaaatacaatctacataaattacccagcacagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actctgcatttaaaataaatttaaaaaatacaatctacataaattacccagcacagataa 320
Query: 121 gtcctctagtaaacaccacttttcttgttatggcttcgagcccaaggttctttgtggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcctctagtaaacaccacttttcttgttatggcttcgagcccaaggttctttgtggaca 380
Query: 181 ctgagccccctctgacatcatcaatagtggggaaagcctgtgcttgccttggctttcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgagccccctctgacatcatcaatagtggggaaagcctgtgcttgccttggctttcctt 440
Query: 241 ccaagcatagtcagttaagaactgaagacaaaataatagccgctcggcaagagtctgtct 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 ccaagcatagtcagttaagaactgaagacaaaataatagccactcggcaagagtctgtct 500
Query: 301 gagtccctccctggccccaactgatgagtataaatgatttgaaa 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtccctccctggccccaactgatgagtataaatgatttgaaa 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_e23.g1 MSMg01no330_e23.g1 CHROMAT_FILE:
MSMg01no330_e23.g1 PHD_FILE: MSMg01no330_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:00 2005
(245 letters)
>mm_chr5_134519595_134520243
Length = 649
Score = 435 bits (225), Expect = e-126
Identities = 243/249 (97%), Gaps = 4/249 (1%)
Strand = Plus / Minus
Query: 1 cttttgctcttgctaaacttgtagggacagcagataggtgtcacgcttccaattgaaaac 60
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 449 cttttgctcttgctaaacttgtagggacagcagataggtgtcacactttcaattgaaaac 390
Query: 61 ggatcttgggctgtgactgagtacttacccagcatgagcaaagccttgtagtcaacactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggatcttgggctgtgactgagtacttacccagcatgagcaaagccttgtagtcaacactc 330
Query: 121 caggaccactaaagaaaaggaagggaggaa-ggaggaatgcataatataaattg-atttt 178
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 329 caggaccactaaagaaaaggaagggaggaagggaggaatgcataatataaattgtatttt 270
Query: 179 tcacagtttggagatgaggag-ctaatattaaggtgctagttcagcag-tgagtgatcac 236
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 269 tcacagtttggagatgaggagtctaatattaaggtgctagttcagcagttgagtgatcac 210
Query: 237 ctagaatct 245
|||||||||
Sbjct: 209 ctagaatct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 649
Length adjustment: 9
Effective length of query: 236
Effective length of database: 640
Effective search space: 151040
Effective search space used: 151040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
