TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACGAGATACGCGG
AATTCTGTTCTTCCTGCCATCTTCTTTTAGTTTTGTTGAAGGATTACTTT
CTTGCTTTTTCTAGGGCGTGGTTTCTGTCCTTGTATTGGTTTTTTTCTGT
TATTATCCTTTGAAAGGCTGGATTCGTGGAAAGATACTGTGTGAATTTGC
TTTTGTTGTGGAATACTTTGGTTTCTCCATCTATGGTAAATGAAAGTTTG
GCTGGGTATAGTAGCCTGGGCTGGCATTTGTGTTTTCTTAGTGTCTGTAT
AACATCTGTCCAGGCTCTTCTGGCTTTCATAGTCTCTGGTAAAAAGTCTG
GTGTAATTCTGATAGGCCTGCCTTTACATGTTACTTGACCTTTTTCCCTT
ACTGCTTTTAATATTCTATCTTTATTGAGTGAATTTGTTGTTCTGATTAT
TATGTGTCAGGAGGAATTTCTTTTCTGGTCCAGTCTATTTGGAGTTCTGT
AGGCTTCTTGTATGTTCATGGGCATGTCTTTCTTTAGGTTTGGGAAGTTT
TCTTCTATAATTTTGTTGAAGATATTTGCTCACCCTTTAAGTTGAAAATC
TTCATTCTCATCTACTCCTATTATCCATAGGTTTGAGCTTCTCATTGTGT
CCTGAATTTCCTGGATGTTTTGAGTTAAGAACTTTTTGCATTTATAATTT
CCTTTGATTGACGGTGTTGAAGGTCTCTAN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAAATCCAGATGCACTTTGAAACTGAAACAG
CTTTCTTCAGCCTGCAACCTTCTATCCCCAGGAGTCAGCCCTCCTGCTCT
GCACAACTGTCTTCCTGAGCTTGTGTCACCAGCTGCTGATTGTAGACATA
CTTGTCACCCCCTCAGAGTACTCCCTCTTCTTCCTGAGCAAGCTCTCATC
TTCAGTCATTCTCTGATTTTTTTTTCTCTTCATATTTCAGATTGGCTGTT
CTTGAATATAAAAAAAAATCATTATTTGATGCCTTCTTTTATTCAATATA
AAGTGGTATGTTTTTCACTCGACTTTATTGAGATATAATTAAAAGACAAA
ATAACCATACTTGATGTGTTCATTTTGGTGATATTTGCAATTCTGTATTC
CTATAATAACATCACCAATAGGAAGCTGATACACATCTCAACCACTCCAT
GAGTATTTTGCTCTTTTTTATATTCTGTTTGCTGTTATTATAAAGAGAAA
ATGAGGAGTAGAAATAGTTCATTGAATTTAGAAAATGGATGTAAGTAACT
CACAAATCACTGCTTCCTTCGCCTGTTTTCATTAACCAGGTTGACCGGCT
TTGCATGTTAGTAGAAGGAAAAAAACCTGAACGCCCCAGACCTGCCAAAT
AGGGTCAACATGTTTGTTTGTTGCAAAATGAACCAN

Query= MSMg01no334_b03.g1 MSMg01no334_b03.g1 CHROMAT_FILE:
MSMg01no334_b03.g1 PHD_FILE: MSMg01no334_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:23 2005
         (430 letters)



>mm_chr5_98303489_98304319
          Length = 831

 Score =  818 bits (423), Expect = 0.0
 Identities = 429/431 (99%), Gaps = 1/431 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagatgcactttgaaactgaaacagctttcttcagcctgcaaccttctatccccaggagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatgcactttgaaactgaaacagctttcttcagcctgcaaccttctatccccaggagt 260

                                                                       
Query: 61  cagccctcctgctctgcacaactgtcttcctgagcttgtgtcaccagctgctgattgtag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagccctcctgctctgcacaactgtcttcctgagcttgtgtcaccagctgctgattgtag 320

                                                                       
Query: 121 acatacttgtcaccccctcagagtactccctcttcttcctgagcaagctctcatcttcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatacttgtcaccccctcagagtactccctcttcttcctgagcaagctctcatcttcag 380

                                                                       
Query: 181 tcattctctgatttttttttctcttcatatttcagattggctgttcttgaatataaaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcattctctgatttttttttctcttcatatttcagattggctgttcttgaatataaaaaa 440

                                                                       
Query: 241 aaa-tcattatttgatgccttcttttattcaatataaagtggtatgtttttcactcgact 299
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 aaaatcattatttgatgccttcttttattcaatataaagtggtatgtttttcactcaact 500

                                                                       
Query: 300 ttattgagatataattaaaagacaaaataaccatacttgatgtgttcattttggtgatat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttattgagatataattaaaagacaaaataaccatacttgatgtgttcattttggtgatat 560

                                                                       
Query: 360 ttgcaattctgtattcctataataacatcaccaataggaagctgatacacatctcaacca 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgcaattctgtattcctataataacatcaccaataggaagctgatacacatctcaacca 620

                      
Query: 420 ctccatgagta 430
           |||||||||||
Sbjct: 621 ctccatgagta 631


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space:   346062
Effective search space used:   346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)