Query= MSMg01no339_g13.b1 MSMg01no339_g13.b1 CHROMAT_FILE:
MSMg01no339_g13.b1 PHD_FILE: MSMg01no339_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:14 2005
(566 letters)
>mm_chr5_21894391_21895356
Length = 966
Score = 710 bits (367), Expect = 0.0
Identities = 367/367 (100%)
Strand = Plus / Minus
Query: 200 tcactgcaatggggaagtaacacgcatcccaagtgagcagtttcagagcctctcagaact 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 tcactgcaatggggaagtaacacgcatcccaagtgagcagtttcagagcctctcagaact 906
Query: 260 acccaccacacctccttagaaacacaccatctagggctttgctctgaccttctgagccag 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 acccaccacacctccttagaaacacaccatctagggctttgctctgaccttctgagccag 846
Query: 320 aagcctgaggagggctcactgagctggagtctcttgacattcttcaggtgatttaaacac 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aagcctgaggagggctcactgagctggagtctcttgacattcttcaggtgatttaaacac 786
Query: 380 agcagcatttgagaaccacagctcgactgttagggggagagaatacaatgatgtgtgagc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 agcagcatttgagaaccacagctcgactgttagggggagagaatacaatgatgtgtgagc 726
Query: 440 cagtgacactgggtgctcccgggaaatcaagtcccttccctgggcctccatgtacttata 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cagtgacactgggtgctcccgggaaatcaagtcccttccctgggcctccatgtacttata 666
Query: 500 aatcagctctggcagtcatcctttcccgtggcttacctgtcattgaagctgttgcctgat 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aatcagctctggcagtcatcctttcccgtggcttacctgtcattgaagctgttgcctgat 606
Query: 560 tgctgca 566
|||||||
Sbjct: 605 tgctgca 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_g13.g1 MSMg01no339_g13.g1 CHROMAT_FILE:
MSMg01no339_g13.g1 PHD_FILE: MSMg01no339_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:14 2005
(472 letters)
>mm_chr5_21711932_21712804
Length = 873
Score = 526 bits (272), Expect = e-153
Identities = 320/360 (88%), Gaps = 39/360 (10%)
Strand = Plus / Plus
Query: 146 tagtgtgttaacagatgctacgtggaggctgaagtagatgcatggtttccgggtaaacat 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagtgtgttaacagatgctacgtggaggctgaagtagatgcatggtttccgggtaaacat 379
Query: 206 gcacaatgtaaattttactttctc-------ttttttttaaaaaaaaaaagctatattga 258
|||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 380 gcacaatgtaaattttactttctctcttttttttttttt------aaaaagctatattga 433
Query: 259 aaatgaaatggatggtagaaccccaaattcactacaatcacaattgagcacaagcacac- 317
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aaatgaaatggatggtagaaccccaaattcactacaatcacaattgagcacaagcacacc 493
Query: 318 -------------------------cacacacacacacacacacctggtacatatgtaca 352
||||||||||||||||||||||| |||||||||||
Sbjct: 494 acacacacacacacacacacacacacacacacacacacacacacctggcacatatgtaca 553
Query: 353 tcctgaggtactattctggtttctgagaaagtagacatgtgtgtctatatacatgaaagt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tcctgaggtactattctggtttctgagaaagtagacatgtgtgtctatatacatgaaagt 613
Query: 413 actgattatgtaatattttaaaatatacaagtactatcttcataatcagaaaaaacatct 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 actgattatgtaatattttaaaatatacaagtactatcttcataatcagaaaaaacatct 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 873
Length adjustment: 10
Effective length of query: 462
Effective length of database: 863
Effective search space: 398706
Effective search space used: 398706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
